Publications by authors named "Derek Ruths"

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A
A large language model-based tool for identifying relationships to industry in research on the carcinogenicity of benzene, cobalt, and aspartame.
Nathan L DeBono, Vanessa Amar, Hardy Hardy, Mary K Schubauer-Berigan, Derek Ruths

Environ Health· September 2025

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Is hate speech detection the solution the world wants?
Sara Parker, Derek Ruths

Proc Natl Acad Sci U S A· March 2023

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T
The epidemiological impact of the Canadian COVID Alert app.
Shuo Sun, Mairead Shaw, Erica E M Moodie, Derek Ruths

Can J Public Health· August 2022

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Dilations and degeneracy in network controllability.
Liam Chung, Derek Ruths, Justin Ruths

Sci Rep· May 2021

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T
The misinformation machine.
Derek Ruths

Science· January 2019

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C
Correlations in the degeneracy of structurally controllable topologies for networks.
Colin Campbell, Steven Aucott, Justin Ruths, Derek Ruths, Katriona Shea

Sci Rep· April 2017

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Recombination and phylogeny: effects and detection.
Derek Ruths, Luay Nakhleh

Int J Bioinform Res Appl· April 2016

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E
Estimating the minimum control count of random network models.
Derek Ruths, Justin Ruths

Sci Rep· January 2016

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T
Topological constraints on network control profiles.
Colin Campbell, Justin Ruths, Derek Ruths, Katriona Shea, Réka Albert

Sci Rep· December 2015

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Social sciences. Social media for large studies of behavior.
Derek Ruths, Jürgen Pfeffer

Science· November 2014

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Network models. Response to Comment on "Control profiles of complex networks".
Justin Ruths, Derek Ruths

Science· October 2014

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C
Control profiles of complex networks.
Justin Ruths, Derek Ruths

Science· March 2014

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U
Understanding social networks requires more than two dimensions.
Derek Ruths, Thomas Shultz

Behav Brain Sci· February 2014

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I
Identification of a novel endoplasmic reticulum stress response element regulated by XBP1.
Michael Misiewicz, Marc-André Déry, Bénédicte Foveau, Julie Jodoin, Derek Ruths

J Biol Chem· July 2013

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O
On the contributions of topological features to transcriptional regulatory network robustness.
Faiyaz Al Zamal, Derek Ruths

BMC Bioinformatics· November 2012

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A
A method for the automated, reliable retrieval of publication-citation records.
Derek Ruths, Faiyaz Al Zamal

PLoS One· August 2010

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International Research Symposium on Ankyloblepharon-Ectodermal Defects-Cleft Lip/Palate (AEC) syndrome.
Mary Fete, Hans vanBokhoven, Suzanne E Clements, Frank McKeon, Dennis R Roop, Derek Ruths

Am J Med Genet A· September 2009

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GS2: an efficiently computable measure of GO-based similarity of gene sets.
Troy Ruths, Derek Ruths, Luay Nakhleh

Bioinformatics· May 2009

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R
Rapidly exploring structural and dynamic properties of signaling networks using PathwayOracle.
Derek Ruths, Luay Nakhleh, Prahlad T Ram

BMC Syst Biol· August 2008

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PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships.
Cuong Than, Derek Ruths, Luay Nakhleh

BMC Bioinformatics· July 2008

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T
The signaling petri net-based simulator: a non-parametric strategy for characterizing the dynamics of cell-specific signaling networks.
Derek Ruths, Melissa Muller, Jen-Te Tseng, Luay Nakhleh, Prahlad T Ram

PLoS Comput Biol· February 2008

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C
Confounding factors in HGT detection: statistical error, coalescent effects, and multiple solutions.
Cuong Than, Derek Ruths, Hideki Innan, Luay Nakhleh

J Comput Biol· May 2007

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Hypothesis generation in signaling networks.
Derek A Ruths, Luay Nakhleh, M Sriram Iyengar, Shrikanth A G Reddy, Prahlad T Ram

J Comput Biol· November 2006

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