Publications by authors named "Dominik Madej"

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Deep Learning-Based Prediction of Decoy Spectra for False Discovery Rate Estimation in Spectral Library Searching.
Chak Ming Jerry Chan, Dominik Madej, Chun Kit Jason Chung, Henry Lam

J Proteome Res· May 2025

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PyViscount: Validating False Discovery Rate Estimation Methods via Random Search Space Partition.
Dominik Madej, Henry Lam

J Proteome Res· March 2025

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Query Mix-Max Method for FDR Estimation Supported by Entrapment Queries.
Dominik Madej, Henry Lam

J Proteome Res· March 2025

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On the use of tandem mass spectra acquired from samples of evolutionarily distant organisms to validate methods for false discovery rate estimation.
Dominik Madej, Henry Lam

Proteomics· August 2024

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Modeling Lower-Order Statistics to Enable Decoy-Free FDR Estimation in Proteomics.
Dominik Madej, Henry Lam

J Proteome Res· April 2023

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Common Decoy Distributions Simplify False Discovery Rate Estimation in Shotgun Proteomics.
Dominik Madej, Long Wu, Henry Lam

J Proteome Res· February 2022

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Proteomics Study of DNA-Protein Crosslinks in Methylmethanesulfonate and Fe-EDTA-Exposed Human Cells.
Yat-Hing Ham, K K Jason Chan, Dominik Madej, Henry Lam, Wan Chan

Chem Res Toxicol· November 2020

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Proteomic analysis of thioproline misincorporation in Escherichia coli.
Jingjing Liu, Chunlin Hao, Long Wu, Dominik Madej, Wan Chan

J Proteomics· January 2020

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