Publications by authors named "Dylan Ogden"

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Atomic-level characterization of the conformational transition pathways in SARS-CoV-1 and SARS-CoV-2 spike proteins.
Dylan S Ogden, Mahmoud Moradi

bioRxiv· November 2022

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Prefusion spike protein conformational changes are slower in SARS-CoV-2 than in SARS-CoV-1.
Vivek Govind Kumar, Dylan S Ogden, Ugochi H Isu, Adithya Polasa, James Losey

J Biol Chem· April 2022

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A Companion Guide to the String Method with Swarms of Trajectories: Characterization, Performance, and Pitfalls.
Haochuan Chen, Dylan Ogden, Shashank Pant, Wensheng Cai, Emad Tajkhorshid

J Chem Theory Comput· March 2022

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Molecular Dynamics-Based Thermodynamic and Kinetic Characterization of Membrane Protein Conformational Transitions.
Dylan Ogden, Mahmoud Moradi

Methods Mol Biol· August 2021

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Differential Dynamic Behavior of Prefusion Spike Proteins of SARS Coronaviruses 1 and 2.
Vivek Govind Kumar, Dylan S Ogden, Ugochi Isu, Adithya Polasa, James Losey

bioRxiv· March 2021

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