Publications by authors named "Ehud Shapiro"

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GMP-like and MLP-like Subpopulations of Hematopoietic Stem and Progenitor Cells Harboring Mutated and at Diagnosis Promote Acute Myeloid Leukemia Relapse: Data of Combined Molecular, Functional, and Genomic Single-Stem-Cell Analyses.
Tal Shahar Gabay, Nofar Stolero, Niv Rabhun, Rawan Sabah, Ofir Raz, Ehud Shapiro

Int J Mol Sci· April 2025

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Tracking Somatic Mutations for Lineage Reconstruction.
Yaara Neumeier, Ofir Raz, Liming Tao, Zipora Marx, Ehud Shapiro

Methods Mol Biol· January 2025

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United for change: deliberative coalition formation to change the status quo.
Edith Elkind, Davide Grossi, Ehud Shapiro, Nimrod Talmon

Soc Choice Welfare· November 2024

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No democracy, no academia.
Einat Albin, Shikma Bressler, Asya Rolls, Michal Schwartz, Ehud Shapiro

Science· August 2023

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Whole-Genome Amplification-Surveying Yield, Reproducibility, and Heterozygous Balance, Reported by STR-Targeting MIPs.
Ofir Raz, Liming Tao, Tamir Biezuner, Tzipy Marx, Yaara Neumeier, Ehud Shapiro

Int J Mol Sci· May 2022

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Efficient acquisition of tens of thousands of short tandem repeats in single-cell whole-genome-amplified DNA.
Liming Tao, Zipora Marx, Ofir Raz, Ehud Shapiro

STAR Protoc· December 2021

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Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees.
Wuming Gong, Alejandro A Granados, Jingyuan Hu, Matthew G Jones, Ofir Raz, Ehud Shapiro

Cell Syst· August 2021

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Comparison of seven single cell whole genome amplification commercial kits using targeted sequencing.
Tamir Biezuner, Ofir Raz, Shiran Amir, Lilach Milo, Rivka Adar, Ehud Shapiro

Sci Rep· August 2021

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Retrospective cell lineage reconstruction in humans by using short tandem repeats.
Liming Tao, Ofir Raz, Zipora Marx, Manjusha S Ghosh, Sandra Huber, Ehud Shapiro

Cell Rep Methods· July 2021

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Short tandem repeat stutter model inferred from direct measurement of in vitro stutter noise.
Ofir Raz, Tamir Biezuner, Adam Spiro, Shiran Amir, Lilach Milo, Ehud Shapiro

Nucleic Acids Res· March 2019

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On the journey from nematode to human, scientists dive by the zebrafish cell lineage tree.
Ehud Shapiro

Genome Biol· May 2018

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The Human Cell Atlas.
Aviv Regev, Sarah A Teichmann, Eric S Lander, Ido Amit, Christophe Benoist, Ehud Shapiro

Elife· December 2017

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A generic, cost-effective, and scalable cell lineage analysis platform.
Tamir Biezuner, Adam Spiro, Ofir Raz, Shiran Amir, Lilach Milo, Ehud Shapiro

Genome Res· November 2016

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Erratum to: eSTGt: a programming and simulation environment for population dynamics.
Adam Spiro, Ehud Shapiro

BMC Bioinformatics· August 2016

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Rationally designed, heterologous S. cerevisiae transcripts expose novel expression determinants.
Tuval Ben-Yehezkel, Shimshi Atar, Hadas Zur, Alon Diament, Eli Goz, Ehud Shapiro

RNA Biol· July 2016

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Accuracy of Answers to Cell Lineage Questions Depends on Single-Cell Genomics Data Quality and Quantity.
Adam Spiro, Ehud Shapiro

PLoS Comput Biol· June 2016

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eSTGt: a programming and simulation environment for population dynamics.
Adam Spiro, Ehud Shapiro

BMC Bioinformatics· April 2016

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Synthesis and cell-free cloning of DNA libraries using programmable microfluidics.
Tuval Ben Yehezkel, Arnaud Rival, Ofir Raz, Rafael Cohen, Zipora Marx, Ehud Shapiro

Nucleic Acids Res· February 2016

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Heuristic for maximizing DNA reuse in synthetic DNA library assembly.
Jonathan Blakes, Ofir Raz, Uriel Feige, Jaume Bacardit, Paweł Widera, Ehud Shapiro

ACS Synth Biol· August 2014

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Comparing algorithms that reconstruct cell lineage trees utilizing information on microsatellite mutations.
Noa Chapal-Ilani, Yosef E Maruvka, Adam Spiro, Yitzhak Reizel, Rivka Adar, Ehud Shapiro

PLoS Comput Biol· July 2014

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Lineage grammars: describing, simulating and analyzing population dynamics.
Adam Spiro, Luca Cardelli, Ehud Shapiro

BMC Bioinformatics· July 2014

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Single cell analysis exposes intratumor heterogeneity and suggests that FLT3-ITD is a late event in leukemogenesis.
Roni Shouval, Liran I Shlush, Shlomit Yehudai-Resheff, Shahnaz Ali, Neta Pery, Ehud Shapiro

Exp Hematol· June 2014

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Accurate, model-based tuning of synthetic gene expression using introns in S. cerevisiae.
Ido Yofe, Zohar Zafrir, Rachel Blau, Maya Schuldiner, Tamir Tuller, Ehud Shapiro

PLoS Genet· June 2014

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Correcting the bias against interdisciplinary research.
Ehud Shapiro

Elife· April 2014

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A synthetic biology approach for evaluating the functional contribution of designer cellulosome components to deconstruction of cellulosic substrates.
Yael Vazana, Yoav Barak, Tamar Unger, Yoav Peleg, Melina Shamshoum, Ehud Shapiro

Biotechnol Biofuels· December 2013

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