Publications by authors named "Emmy Earnest"

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Highly accurate response prediction in high-risk early breast cancer patients using a biophysical simulation platform.
Frederick M Howard, Gong He, Joseph R Peterson, J R Pfeiffer, Emmy Earnest

Breast Cancer Res Treat· November 2022

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Essential metabolism for a minimal cell.
Marian Breuer, Emmy E Earnest, Chuck Merryman, Kim S Wise, Lijie Sun

Elife· January 2019

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Simulating biological processes: stochastic physics from whole cells to colonies.
Emmy E Earnest, John A Cole, Zaida Luthey-Schulten

Rep Prog Phys· May 2018

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Challenges of Integrating Stochastic Dynamics and Cryo-Electron Tomograms in Whole-Cell Simulations.
Emmy E. Earnest, Reika Watanabe, John E Stone, Julia Mahamid, Wolfgang Baumeister

J Phys Chem B· April 2017

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Ribosome biogenesis in replicating cells: Integration of experiment and theory.
Emmy E Earnest, John A Cole, Joseph R Peterson, Michael J Hallock, Thomas E Kuhlman

Biopolymers· October 2016

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Toward a Whole-Cell Model of Ribosome Biogenesis: Kinetic Modeling of SSU Assembly.
Emmy E Earnest, Jonathan Lai, Ke Chen, Michael J Hallock, James R Williamson

Biophys J· September 2015

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Single-molecule packaging initiation in real time by a viral DNA packaging machine from bacteriophage T4.
Reza Vafabakhsh, Kiran Kondabagil, Emmy E Earnest, Kyung Suk Lee, Zhihong Zhang

Proc Natl Acad Sci U S A· October 2014

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Corrigendum: DNA looping increases the range of bistability in a stochastic model of the lac genetic switch (2013 Phys. Biol. 10 026002).
Emmy E Earnest, Elijah Roberts, Michael Assaf, Karin Dahmen, Zaida Luthey-Schulten

Phys Biol· March 2014

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DNA looping increases the range of bistability in a stochastic model of the lac genetic switch.
Emmy E Earnest, Elijah Roberts, Michael Assaf, Karin Dahmen, Zaida Luthey-Schulten

Phys Biol· April 2013

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Reverse-chaperoning activity of an AAA+ protein.
Cheng Liu, Mary C McKinney, Yi-Hsing Chen, Emmy E Earnest, Xinghua Shi

Biophys J· March 2011

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