Publications by authors named "Erich Brunner"

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RoCK and ROI: single-cell transcriptomics with multiplexed enrichment of selected transcripts and region-specific sequencing.
Giulia Moro, Izaskun Mallona, Malwine J Barz, Joël Maillard, Michael David Brügger, Erich Brunner

Nat Commun· December 2025

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Chromosome separation during Drosophila male meiosis I requires separase-mediated cleavage of the homolog conjunction protein UNO.
Joe Weber, Zeynep Kabakci, Soumya Chaurasia, Erich Brunner, Christian F Lehner

PLoS Genet· October 2020

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CRISPR-induced double-strand breaks trigger recombination between homologous chromosome arms.
Erich Brunner, Ryohei Yagi, Marc Debrunner, Dezirae Beck-Schneider, Alexa Burger

Life Sci Alliance· June 2019

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A transcriptomics resource reveals a transcriptional transition during ordered sarcomere morphogenesis in flight muscle.
Maria L Spletter, Christiane Barz, Assa Yeroslaviz, Xu Zhang, Sandra B Lemke, Erich Brunner

Elife· May 2018

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Generation of genome-modified Drosophila cell lines using SwAP.
Alexandra Franz, Erich Brunner, Konrad Basler

Fly (Austin)· October 2017

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Combining Time-of-Flight Secondary Ion Mass Spectrometry Imaging Mass Spectrometry and CARS Microspectroscopy Reveals Lipid Patterns Reminiscent of Gene Expression Patterns in the Wing Imaginal Disc of Drosophila melanogaster.
Florian Marty, Gianluca Rago, Donald F Smith, Xiaoli Gao, Gert B Eijkel, Erich Brunner

Anal Chem· September 2017

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Probing the canonicity of the Wnt/Wingless signaling pathway.
Alexandra Franz, Daria Shlyueva, Erich Brunner, Alexander Stark, Konrad Basler

PLoS Genet· April 2017

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Cooperative target mRNA destabilization and translation inhibition by miR-58 microRNA family in C. elegans.
Deni Subasic, Anneke Brümmer, Yibo Wu, Sérgio Morgado Pinto, Jochen Imig, Erich Brunner

Genome Res· November 2015

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DIGESTIF: a universal quality standard for the control of bottom-up proteomics experiments.
Dorothée Lebert, Mathilde Louwagie, Sandra Goetze, Guillaume Picard, Reto Ossola, Erich Brunner

J Proteome Res· February 2015

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Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data.
Ermir Qeli, Ulrich Omasits, Sandra Goetze, Daniel J Stekhoven, Juerg E Frey, Erich Brunner

J Proteomics· August 2014

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Large-scale imaginal disc sorting: A protocol for "omics"-approaches.
Florian Marty, Claudia Rockel-Bauer, Nikiana Simigdala, Erich Brunner, Konrad Basler

Methods· June 2014

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The hemolymph proteome of fed and starved Drosophila larvae.
Björn Handke, Ingrid Poernbacher, Sandra Goetze, Christian H Ahrens, Ulrich Omasits, Erich Brunner

PLoS One· February 2014

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Multiorder correction algorithms to remove image distortions from mass spectrometry imaging data sets.
Florian Gerber, Florian Marty, Gert B Eijkel, Konrad Basler, Erich Brunner

Anal Chem· November 2013

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The HUPO initiative on Model Organism Proteomes, iMOP.
Alexandra M E Jones, Ruedi Aebersold, Christian H Ahrens, Rolf Apweiler, Katja Baerenfaller, Erich Brunner

Proteomics· February 2012

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Generating and navigating proteome maps using mass spectrometry.
Christian H Ahrens, Erich Brunner, Ermir Qeli, Konrad Basler, Ruedi Aebersold

Nat Rev Mol Cell Biol· November 2010

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Model organism proteomics.
Christian H Ahrens, Sabine P Schrimpf, Erich Brunner, Ruedi Aebersold

J Proteomics· October 2010

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Madm (Mlf1 adapter molecule) cooperates with Bunched A to promote growth in Drosophila.
Silvia Gluderer, Erich Brunner, Markus Germann, Virginija Jovaisaite, Changqing Li

J Biol· August 2010

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Coop functions as a corepressor of Pangolin and antagonizes Wingless signaling.
Haiyun Song, Sandra Goetze, Johannes Bischof, Chloe Spichiger-Haeusermann, Marco Kuster, Erich Brunner

Genes Dev· May 2010

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Quantitative proteomics: a central technology for systems biology.
Christian H Ahrens, Erich Brunner, Konrad Basler

J Proteomics· February 2010

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Identification and functional characterization of N-terminally acetylated proteins in Drosophila melanogaster.
Sandra Goetze, Ermir Qeli, Christian Mosimann, An Staes, Bertran Gerrits, Erich Brunner

PLoS Biol· November 2009

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Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function.
Monica A Grobei, Ermir Qeli, Erich Brunner, Hubert Rehrauer, Runxuan Zhang

Genome Res· October 2009

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A combined proteomic and genetic analysis identifies a role for the lipid desaturase Desat1 in starvation-induced autophagy in Drosophila.
Katja Köhler, Erich Brunner, Xue Li Guan, Karin Boucke, Urs F Greber

Autophagy· October 2009

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The comprehensive native interactome of a fully functional tagged prion protein.
Dorothea Rutishauser, Kirsten D Mertz, Rita Moos, Erich Brunner, Thomas Rülicke

PLoS One· April 2009

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Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes.
Sabine P Schrimpf, Manuel Weiss, Lukas Reiter, Christian H Ahrens, Marko Jovanovic, Erich Brunner

PLoS Biol· March 2009

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The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation.
Sandra N Loevenich, Erich Brunner, Nichole L King, Eric W Deutsch, Stephen E Stein

BMC Bioinformatics· February 2009

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