Publications by authors named "Ester Martin"

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A scalable reinforcement learning approach for screening large peptide libraries for bioactive peptide discovery.
Mohit Pandey, Jane Foo, Shabnam Massah, Morgan A Alford, Hazem Mslati, Martin Ester

Nat Commun· November 2025

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scMUSCL: multi-source transfer learning for clustering scRNA-seq data.
Arash Khoeini, Funda Sar, Yen-Yi Lin, Colin Collins, Martin Ester

Bioinformatics· May 2025

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Machine learning model identifies genetic predictors of cisplatin-induced ototoxicity in CERS6 and TLR4.
Ali Arab, Bahareh Kashani, Miguel Cordova-Delgado, Erika N Scott, Kaveh Alemi, Martin Ester

Comput Biol Med· December 2024

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Identifying Synergistic Components of Botanical Fungicide Formulations Using Interpretable Graph Neural Networks.
Oliver Snow, Amirreza Kazemi, Forum Bhanshali, Alyas Nasiri, Annett Rozek, Martin Ester

J Chem Inf Model· August 2024

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Phenotype prediction from single-cell RNA-seq data using attention-based neural networks.
Yuzhen Mao, Yen-Yi Lin, Nelson K Y Wong, Stanislav Volik, Funda Sar, Martin Ester

Bioinformatics· February 2024

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Multi-treatment Effect Estimation from Biomedical Data.
Raquel Aoki, Yizhou Chen, Martin Ester

Pac Symp Biocomput· December 2022

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Ligand Binding Prediction Using Protein Structure Graphs and Residual Graph Attention Networks.
Mohit Pandey, Mariia Radaeva, Hazem Mslati, Olivia Garland, Michael Fernandez, Martin Ester

Molecules· August 2022

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Aristotle: stratified causal discovery for omics data.
Mehrdad Mansouri, Sahand Khakabimamaghani, Leonid Chindelevitch, Martin Ester

BMC Bioinformatics· January 2022

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Healthy memory aging - the benefits of regular daily activities increase with age.
Olga Krakovska, Gregory J Christie, Faranak Farzan, Andrew Sixsmith, Martin Ester

Aging (Albany NY)· December 2021

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Drug sensitivity prediction from cell line-based pharmacogenomics data: guidelines for developing machine learning models.
Hossein Sharifi-Noghabi, Soheil Jahangiri-Tazehkand, Petr Smirnov, Casey Hon, Anthony Mammoliti, Martin Ester

Brief Bioinform· November 2021

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The clinical laboratory: a decision maker hub.
María Salinas, Maite López-Garrigós, Emilio Flores, Ester Martín, Carlos Leiva-Salinas

Clin Chem Lab Med· September 2021

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Moderate-Intensity Physical Activity, Music and Art Activities Preserved Cognitive Health in Older Adults: An Argument for Social Prescribing Solution.
Ali Arab, Gregory J Christie, Mehrdad Mansouri, Maryam Ahmadzadeh, Andrew Sixsmith, Martin Ester

Front Aging Neurosci· August 2021

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Identification of differentially expressed gene modules in heterogeneous diseases.
Olga Zolotareva, Sahand Khakabimamaghani, Olga I Isaeva, Zoe Chervontseva, Alexey Savchik, Martin Ester

Bioinformatics· July 2021

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ParKCa: Causal Inference with Partially Known Causes.
Raquel Aoki, Martin Ester

Pac Symp Biocomput· April 2021

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A fast and fully-automated deep-learning approach for accurate hemorrhage segmentation and volume quantification in non-contrast whole-head CT.
Ali Arab, Betty Chinda, George Medvedev, William Siu, Hui Guo, Martin Ester

Sci Rep· November 2020

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Deep Learning Modeling of Androgen Receptor Responses to Prostate Cancer Therapies.
Oliver Snow, Nada Lallous, Martin Ester, Artem Cherkasov

Int J Mol Sci· August 2020

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AITL: Adversarial Inductive Transfer Learning with input and output space adaptation for pharmacogenomics.
Hossein Sharifi-Noghabi, Shuman Peng, Olga Zolotareva, Colin C Collins, Martin Ester

Bioinformatics· July 2020

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Tissue-Specific Subcellular Localization Prediction Using Multi-Label Markov Random Fields.
Lu Zhu, Ralf Hofestadt, Martin Ester

IEEE/ACM Trans Comput Biol Bioinform· March 2020

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Performance comparison of linear and non-linear feature selection methods for the analysis of large survey datasets.
Olga Krakovska, Gregory Christie, Andrew Sixsmith, Martin Ester, Sylvain Moreno

PLoS One· December 2019

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Uncovering the subtype-specific temporal order of cancer pathway dysregulation.
Sahand Khakabimamaghani, Dujian Ding, Oliver Snow, Martin Ester

PLoS Comput Biol· November 2019

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SUBSTRA: Supervised Bayesian Patient Stratification.
Sahand Khakabimamaghani, Yogeshwar D Kelkar, Bruno M Grande, Ryan D Morin, Martin Ester

Bioinformatics· September 2019

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Collaborative intra-tumor heterogeneity detection.
Sahand Khakabimamaghani, Salem Malikic, Jeffrey Tang, Dujian Ding, Ryan Morin, Martin Ester

Bioinformatics· July 2019

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MOLI: multi-omics late integration with deep neural networks for drug response prediction.
Hossein Sharifi-Noghabi, Olga Zolotareva, Colin C Collins, Martin Ester

Bioinformatics· July 2019

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HUME: large-scale detection of causal genetic factors of adverse drug reactions.
Mehrdad Mansouri, Bowei Yuan, Colin J D Ross, Bruce C Carleton, Martin Ester

Bioinformatics· December 2018

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Automation of CT-based haemorrhagic stroke assessment for improved clinical outcomes: study protocol and design.
Betty Chinda, George Medvedev, William Siu, Martin Ester, Ali Arab

BMJ Open· April 2018

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