Publications by authors named "Fangping Mu"

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LMTK2 switches on canonical TGF-β1 signaling in human bronchial epithelial cells.
Daniel F Cruz, Joshua Donovan, Ewelina D Hejenkowska, Fangping Mu, Ipsita Banerjee

Am J Physiol Lung Cell Mol Physiol· November 2024

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bcRflow: a Nextflow pipeline for characterizing B cell receptor repertoires from non-targeted transcriptomic data.
Brent T Schlegel, Michael Morikone, Fangping Mu, Wan-Yee Tang, Gary Kohanbash

NAR Genom Bioinform· September 2024

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TGF-β1 Inhibition of ACE2 Mediated by miRNA Uncovers Novel Mechanism of SARS-CoV-2 Pathogenesis.
Ewelina D Hejenkowska, Nilay Mitash, Joshua E Donovan, Anvita Chandra, Carol Bertrand, Fangping Mu

J Innate Immun· December 2023

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Genomic glucocorticoid action in embryonic mouse neural stem cells.
Kimberly J Berry, Uma Chandran, Fangping Mu, Dinesh K Deochand, T Lei

Mol Cell Endocrinol· March 2023

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Differential Gene Expression Analysis Reveals Global LMTK2 Regulatory Network and Its Role in TGF-β1 Signaling.
Daniel F Cruz, Nilay Mitash, Fangping Mu, Carlos M Farinha, Agnieszka Swiatecka-Urban

Front Oncol· March 2021

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Precise Targeting of miRNA Sites Restores CFTR Activity in CF Bronchial Epithelial Cells.
Chiara De Santi, Elena Fernández Fernández, Rachel Gaul, Sebastian Vencken, Arlene Glasgow, Fangping Mu

Mol Ther· April 2020

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Transforming Growth Factor-β1 Selectively Recruits microRNAs to the RNA-Induced Silencing Complex and Degrades CFTR mRNA under Permissive Conditions in Human Bronchial Epithelial Cells.
Nilay Mitash, Fangping Mu, Joshua E Donovan, Michael M Myerburg, Sarangarajan Ranganathan

Int J Mol Sci· October 2019

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Automated genomic context analysis and experimental validation platform for discovery of prokaryote transcriptional regulator functions.
Ricardo Martí-Arbona, Fangping Mu, Kristy L Nowak-Lovato, Melinda S Wren, Clifford J Unkefer

BMC Genomics· December 2014

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Binding of nucleoid-associated protein fis to DNA is regulated by DNA breathing dynamics.
Kristy Nowak-Lovato, Ludmil B Alexandrov, Afsheen Banisadr, Amy L Bauer, Alan R Bishop, Fangping Mu, Kim Ø Rasmussen

PLoS Comput Biol· June 2013

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Improved predictions of transcription factor binding sites using physicochemical features of DNA.
Mark Maienschein-Cline, Aaron R Dinner, William S Hlavacek, Fangping Mu

Nucleic Acids Res· December 2012

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Prediction of metabolic reactions based on atomic and molecular properties of small-molecule compounds.
Fangping Mu, Clifford J Unkefer, Pat J Unkefer, William S Hlavacek

Bioinformatics· June 2011

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Using sequence-specific chemical and structural properties of DNA to predict transcription factor binding sites.
Amy L Bauer, William S Hlavacek, Pat J Unkefer, Fangping Mu

PLoS Comput Biol· November 2010

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Carbon-fate maps for metabolic reactions.
Fangping Mu, Robert F Williams, Clifford J Unkefer, Pat J Unkefer, James R Faeder

Bioinformatics· December 2007

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Prediction of oxidoreductase-catalyzed reactions based on atomic properties of metabolites.
Fangping Mu, Pat J Unkefer, Clifford J Unkefer, William S Hlavacek

Bioinformatics· December 2006

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