Publications by authors named "Fatih Yasar"

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The stability and dynamics of the Aβ40/Aβ42 interlaced mixed fibrils.
Asis K Jana, Özgür Güven, Fatih Yaşar

J Biomol Struct Dyn· January 2025

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Molecular Insight into the Effect of HIV-TAT Protein on Amyloid-β Peptides.
Asis K Jana, Recep Keskin, Fatih Yaşar

ACS Omega· June 2024

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Catalytic Reaction Mechanism of Bacterial GH92 α-1,2-Mannosidase: A QM/MM Metadynamics Study.
Mert Sagiroglugil, Fatih Yasar

Chemphyschem· December 2023

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PD-L1 and PD-L2 expression in colorectal cancer.
Ozgul Zeynep, Canaz Funda, Yılmaz Evrim, Arık Deniz, Yıldız Bülent, Yasar N Fatih

Indian J Pathol Microbiol· January 2023

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Resolution exchange with tunneling for enhanced sampling of protein landscapes.
Fatih Yasar, Alan J Ray, Ulrich H E Hansmann

Phys Rev E· July 2022

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Interconversion between Serum Amyloid A Native and Fibril Conformations.
Fatih Yasar, Miranda S Sheridan, Ulrich H E Hansmann

ACS Omega· April 2022

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Role of Notch, IL-1 and leptin expression in colorectal cancer.
Nilufer Erkasap, Rumeysa Ozyurt, Mete Ozkurt, Serdar Erkasap, Fatih Yasar

Exp Ther Med· June 2021

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Response to "Comment on 'Replica-exchange-with-tunneling for fast exploration of protein landscapes"' [J. Chem. Phys. 145, 057101 (2016)].
Fatih Yaşar, Nathan A Bernhardt, Ulrich H E Hansmann

J Chem Phys· August 2016

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Replica-exchange-with-tunneling for fast exploration of protein landscapes.
Fatih Yaşar, Nathan A Bernhardt, Ulrich H E Hansmann

J Chem Phys· December 2015

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Freestyle Perforator-Based Fasciocutaneous Flap Reconstruction in Nicolau Syndrome-Related Tissue Necrosis.
Emre A Kocman, Fatih N Yaşar, Aydan A Kose, Yakup Cil, Yakup Karabagli

Indian J Surg· December 2015

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Omental infarction due to a patent foramen ovale after a long flight: a variant of economy class syndrome.
Fatih Yaşar, Özcan Özdemir, Mahmut Kebapcı, Ömer Göktekin, Enver İhtiyar

Anadolu Kardiyol Derg· November 2014

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Folding and self-assembly of a small heterotetramer.
Fatih Yaşar, Adam K Sieradzan, Ulrich H E Hansmann

J Chem Phys· March 2014

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Multicanonical Molecular Dynamics Simulations of the N-terminal Domain of Protein L9.
Fatih Yaşar, Ping Jiang, Ulrich H E Hansmann

Europhys Lett· February 2014

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Preoperative serum tumor marker levels in gastric cancer.
Erdal Polat, Ugur Duman, Mustafa Duman, Kivanc Derya Peker, Cebrail Akyuz, Necdet Fatih Yasar

Pak J Med Sci· January 2014

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In silico cross seeding of Aβ and amylin fibril-like oligomers.
Workalemahu M Berhanu, Fatih Yaşar, Ulrich H E Hansmann

ACS Chem Neurosci· November 2013

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Sampling of Protein Folding Transitions: Multicanonical Versus Replica Exchange Molecular Dynamics.
Ping Jiang, Fatih Yaşar, Ulrich H E Hansmann

J Chem Theory Comput· August 2013

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Enhancing the affinity of SEB-binding peptides by repeating their sequence.
Fahriye Ceyda Dudak, Nesrin Kılıç, Kadir Demir, Fatih Yaşar, Ismail Hakkı Boyacı

Biopolymers· August 2012

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Effects of doxycycline on renal ischemia reperfusion injury induced by abdominal compartment syndrome.
Enver Ihtiyar, N Fatih Yaşar, Nilüfer Erkasap, Tülay Köken, Murat Tosun

J Surg Res· May 2011

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Perforated mixed carcinoid-adenocarcinoma in transverse colon and at gastroenterostomy site: case report.
Enver Ihtiyar, Ozgül Paşaoğlu, Serdar Erkasap, Barış R Karakaş, Fatih N Yaşar

World J Surg Oncol· December 2010

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Thermodynamic and structural analysis of interactions between peptide ligands and SEB.
Fahriye Ceyda Dudak, Esra Acar Soykut, Murat Erman Oğuz, Fatih Yaşar, Ismail Hakki Boyaci

J Mol Recognit· September 2010

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Effects of doxycycline on intestinal ischemia reperfusion injury induced by abdominal compartment syndrome in a rat model.
N Fatih Yaşar, Riza Ozdemir, Enver Ihtiyar, Nilüfer Erkasap, Tülay Köken

Curr Ther Res Clin Exp· June 2010

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Molecular modeling of various peptide sequences of gliadins and low-molecular-weight glutenin subunits.
Fatih Yaşar, Süeda Celik, Hamit Köksel

Nahrung· August 2003

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Efficiency of the multicanonical simulation method as applied to peptides of increasing size: the heptapeptide deltorphin.
Fatih Yaşar, Handan Arkin, Tarik Celik, Bernd A Berg, Hagai Meirovitch

J Comput Chem· September 2002

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