Publications by authors named "Florent Angly"

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Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon.
Florent E Angly, Olga Pantos, Thomas C Morgan, Virginia Rich, Hemerson Tonin

PeerJ· March 2016

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Marine microbial communities of the Great Barrier Reef lagoon are influenced by riverine floodwaters and seasonal weather events.
Florent E Angly, Candice Heath, Thomas C Morgan, Hemerson Tonin, Virginia Rich

PeerJ· February 2016

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Evaluation of viral genome assembly and diversity estimation in deep metagenomes.
Daniel Aguirre de Cárcer, Florent E Angly, Antonio Alcamí

BMC Genomics· November 2014

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CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction.
Florent E Angly, Paul G Dennis, Adam Skarshewski, Inka Vanwonterghem, Philip Hugenholtz

Microbiome· August 2014

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The Bio-Community Perl toolkit for microbial ecology.
Florent E Angly, Christopher J Fields, Gene W Tyson

Bioinformatics· July 2014

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Future reef decalcification under a business-as-usual CO2 emission scenario.
Sophie G Dove, David I Kline, Olga Pantos, Florent E Angly, Gene W Tyson

Proc Natl Acad Sci U S A· September 2013

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Oxygen minimum zones harbour novel viral communities with low diversity.
Noriko Cassman, Alejandra Prieto-Davó, Kevin Walsh, Genivaldo G Z Silva, Florent Angly

Environ Microbiol· November 2012

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Grinder: a versatile amplicon and shotgun sequence simulator.
Florent E Angly, Dana Willner, Forest Rohwer, Philip Hugenholtz, Gene W Tyson

Nucleic Acids Res· July 2012

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Metagenomic analysis of DNA viruses in a wastewater treatment plant in tropical climate.
Hideyuki Tamaki, Rui Zhang, Florent E Angly, Shota Nakamura, Pei-Ying Hong

Environ Microbiol· February 2012

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Phage-bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome.
Margret E Berg Miller, Carl J Yeoman, Nicholas Chia, Susannah G Tringe, Florent E Angly

Environ Microbiol· January 2012

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Phage encoded H-NS: a potential achilles heel in the bacterial defence system.
Connor T Skennerton, Florent E Angly, Mya Breitbart, Lauren Bragg, Shaomei He

PLoS One· October 2011

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Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity.
Dana Willner, Mike Furlan, Robert Schmieder, Juris A Grasis, David T Pride, Florent E Angly

Proc Natl Acad Sci U S A· March 2011

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Next generation sequence assembly with AMOS.
Todd J Treangen, Dan D Sommer, Florent E Angly, Sergey Koren, Mihai Pop

Curr Protoc Bioinformatics· March 2011

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[Are divergent viral communities controlling individual gut microbiota?].
Florent Angly, Gene Tyson

Med Sci (Paris)· March 2011

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Viruses in the faecal microbiota of monozygotic twins and their mothers.
Alejandro Reyes, Matthew Haynes, Nicole Hanson, Florent E Angly, Andrew C Heath

Nature· July 2010

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Viral and microbial community dynamics in four aquatic environments.
Beltran Rodriguez-Brito, Linlin Li, Linda Wegley, Mike Furlan, Florent Angly

ISME J· June 2010

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The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.
Florent E Angly, Dana Willner, Alejandra Prieto-Davó, Robert A Edwards, Robert Schmieder

PLoS Comput Biol· December 2009

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Genomic analysis of multiple Roseophage SIO1 strains.
Florent Angly, Merry Youle, Bahador Nosrat, Shailaja Srinagesh, Beltran Rodriguez-Brito

Environ Microbiol· November 2009

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Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis and non-cystic fibrosis individuals.
Dana Willner, Mike Furlan, Matthew Haynes, Robert Schmieder, Florent E Angly

PLoS One· October 2009

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Metagenomic analysis of stressed coral holobionts.
Rebecca Vega Thurber, Dana Willner-Hall, Beltran Rodriguez-Mueller, Christelle Desnues, Robert A Edwards, Florent Angly

Environ Microbiol· August 2009

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Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa.
Rebecca L Vega Thurber, Katie L Barott, Dana Hall, Hong Liu, Beltran Rodriguez-Mueller, Florent E Angly

Proc Natl Acad Sci U S A· November 2008

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Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome.
Ani Qu, Jennifer M Brulc, Melissa K Wilson, Bibiana F Law, James R Theoret, Florent Angly

PLoS One· August 2008

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Viral diversity and dynamics in an infant gut.
Mya Breitbart, Matthew Haynes, Scott Kelley, Florent Angly, Robert A Edwards

Res Microbiol· June 2008

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Functional metagenomic profiling of nine biomes.
Elizabeth A Dinsdale, Robert A Edwards, Dana Hall, Florent Angly, Mya Breitbart

Nature· April 2008

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Biodiversity and biogeography of phages in modern stromatolites and thrombolites.
Christelle Desnues, Beltran Rodriguez-Brito, Steve Rayhawk, Scott Kelley, Tuong Tran, Florent E Angly

Nature· March 2008

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