Publications by authors named "Frank Panitz"

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Response of primary mammary epithelial cells to pathogen challenge in dairy cows with divergent genomic breeding values for udder health.
Terhi Iso-Touru, Daniel Fischer, Frank Panitz, Suvi Taponen, Zexi Cai

Genomics· September 2025

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TrAnnoScope: A Modular Snakemake Pipeline for Full-Length Transcriptome Analysis and Functional Annotation.
Aysevil Pektas, Frank Panitz, Bo Thomsen

Genes (Basel)· November 2024

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Genes and pathways revealed by whole transcriptome analysis of milk derived bovine mammary epithelial cells after Escherichia coli challenge.
Terhi Iso-Touru, Frank Panitz, Daniel Fischer, Minna K Kyläniemi, Suvi Taponen

Vet Res· February 2024

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Author Correction: Gene-associated markers provide tools for tackling illegal fishing and false eco-certification.
Einar E Nielsen, Alessia Cariani, Eoin Mac Aoidh, Gregory E Maes, Ilaria Milano, Frank Panitz

Nat Commun· November 2019

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Biochemical and structural analyses suggest that plasminogen activators coevolved with their cognate protein substrates and inhibitors.
Agnieszka Jendroszek, Jeppe B Madsen, Andrés Chana-Muñoz, Daniel M Dupont, Anni Christensen, Frank Panitz

J Biol Chem· March 2019

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Origin and diversification of the plasminogen activation system among chordates.
Andrés Chana-Muñoz, Agnieszka Jendroszek, Malene Sønnichsen, Tobias Wang, Michael Ploug, Frank Panitz

BMC Evol Biol· January 2019

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MicroRNA-guided prioritization of genome-wide association signals reveals the importance of microRNA-target gene networks for complex traits in cattle.
Lingzhao Fang, Peter Sørensen, Goutam Sahana, Frank Panitz, Guosheng Su

Sci Rep· June 2018

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Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals.
Aniek C Bouwman, Hans D Daetwyler, Amanda J Chamberlain, Carla Hurtado Ponce, Mehdi Sargolzaei, Frank Panitz

Nat Genet· March 2018

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The first draft reference genome of the American mink (Neovison vison).
Zexi Cai, Bent Petersen, Goutam Sahana, Lone B Madsen, Knud Larsen, Frank Panitz

Sci Rep· November 2017

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Multi-tissue RNA-seq and transcriptome characterisation of the spiny dogfish shark (Squalus acanthias) provides a molecular tool for biological research and reveals new genes involved in osmoregulation.
Andres Chana-Munoz, Agnieszka Jendroszek, Malene Sønnichsen, Rune Kristiansen, Jan K Jensen, Frank Panitz

PLoS One· October 2017

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Latency transition of plasminogen activator inhibitor type 1 is evolutionarily conserved.
Agnieszka Jendroszek, Malene S Sønnichsen, Andrés C Muñoz, Kato Leyman, Anni Christensen, Frank Panitz

Thromb Haemost· August 2017

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Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes.
Ashutosh Das, Frank Panitz, Vivi Raundahl Gregersen, Christian Bendixen, Lars-Erik Holm

BMC Genomics· December 2015

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A synteny-based draft genome sequence of the forage grass Lolium perenne.
Stephen L Byrne, Istvan Nagy, Matthias Pfeifer, Ian Armstead, Suresh Swain, Frank Panitz

Plant J· November 2015

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Draft Genome Sequence of Clostridium tyrobutyricum Strain DIVETGP, Isolated from Cow's Milk for Grana Padano Production.
Alessio Soggiu, Cristian Piras, Stefano Gaiarsa, Emøke Bendixen, Frank Panitz

Genome Announc· March 2015

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A 660-Kb deletion with antagonistic effects on fertility and milk production segregates at high frequency in Nordic Red cattle: additional evidence for the common occurrence of balancing selection in livestock.
Naveen Kumar Kadri, Goutam Sahana, Carole Charlier, Terhi Iso-Touru, Bernt Guldbrandtsen, Frank Panitz

PLoS Genet· January 2014

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Genome wide allele frequency fingerprints (GWAFFs) of populations via genotyping by sequencing.
Stephen Byrne, Adrian Czaban, Bruno Studer, Frank Panitz, Christian Bendixen

PLoS One· August 2013

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Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat.
Tatiana Belova, Bujie Zhan, Jonathan Wright, Mario Caccamo, Torben Asp, Frank Panitz

BMC Genomics· April 2013

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The genome and transcriptome of perennial ryegrass mitochondria.
Md Shofiqul Islam, Bruno Studer, Stephen L Byrne, Jacqueline D Farrell, Frank Panitz

BMC Genomics· March 2013

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SNP discovery using Next Generation Transcriptomic Sequencing in Atlantic herring (Clupea harengus).
Sarah J Helyar, Morten T Limborg, Dorte Bekkevold, Massimiliano Babbucci, Jeroen van Houdt, Frank Panitz

PLoS One· January 2013

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Analyses of pig genomes provide insight into porcine demography and evolution.
Martien A M Groenen, Alan L Archibald, Hirohide Uenishi, Christopher K Tuggle, Yasuhiro Takeuchi, Frank Panitz

Nature· November 2012

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Spatio-temporal regulation of ADAR editing during development in porcine neural tissues.
Morten T Venø, Jesper B Bramsen, Christian Bendixen, Frank Panitz, Ida Elisabeth Holm

RNA Biol· August 2012

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Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms.
Kasper U Kjeldsen, Thomas Bataillon, Nicolás Pinel, Stéphane De Mita, Marie B Lund, Frank Panitz

Genome Biol Evol· July 2012

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Gene-associated markers provide tools for tackling illegal fishing and false eco-certification.
Einar E Nielsen, Alessia Cariani, Eoin Mac Aoidh, Gregory E Maes, Ilaria Milano, Frank Panitz

Nat Commun· May 2012

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Novel tools for conservation genomics: comparing two high-throughput approaches for SNP discovery in the transcriptome of the European hake.
Ilaria Milano, Massimiliano Babbucci, Frank Panitz, Rob Ogden, Rasmus O Nielsen

PLoS One· April 2012

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A transcriptome map of perennial ryegrass (Lolium perenne L.).
Bruno Studer, Stephen Byrne, Rasmus O Nielsen, Frank Panitz, Christian Bendixen

BMC Genomics· April 2012

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