Publications by authors named "Frank Suits"

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Pipelines and Systems for Threshold-Avoiding Quantification of LC-MS/MS Data.
Alejandro Sánchez Brotons, Jonatan O Eriksson, Marcel Kwiatkowski, Justina C Wolters, Ido P Kema, Frank Suits

Anal Chem· August 2021

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MSIWarp: A General Approach to Mass Alignment in Mass Spectrometry Imaging.
Jonatan O Eriksson, Alejandro Sánchez Brotons, Melinda Rezeli, Frank Suits, György Markó-Varga

Anal Chem· December 2020

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Proteogenomics: Key Driver for Clinical Discovery and Personalized Medicine.
Ruggero Barbieri, Victor Guryev, Corry-Anke Brandsma, Frank Suits, Rainer Bischoff

Adv Exp Med Biol· June 2017

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Identification of Analytical Factors Affecting Complex Proteomics Profiles Acquired in a Factorial Design Study with Analysis of Variance: Simultaneous Component Analysis.
Vikram Mitra, Natalia Govorukhina, Gooitzen Zwanenburg, Huub Hoefsloot, Inge Westra, Frank Suits

Anal Chem· April 2016

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Inversion of peak elution order prevents uniform time alignment of complex liquid-chromatography coupled to mass spectrometry datasets.
Vikram Mitra, Age Smilde, Huub Hoefsloot, Frank Suits, Rainer Bischoff

J Chromatogr A· December 2014

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Queries of MALDI-imaging global datasets identifying ion mass signatures associated with tissue compartments.
Thomas E Fehniger, Frank Suits, Ákos Végvári, Peter Horvatovich, Martyn Foster

Proteomics· April 2014

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Correlation queries for mass spectrometry imaging.
Frank Suits, Thomas E Fehniger, Akos Végvári, György Marko-Varga, Peter Horvatovich

Anal Chem· May 2013

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A critical assessment of feature selection methods for biomarker discovery in clinical proteomics.
Christin Christin, Huub C J Hoefsloot, Age K Smilde, B Hoekman, Frank Suits

Mol Cell Proteomics· January 2013

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msCompare: a framework for quantitative analysis of label-free LC-MS data for comparative candidate biomarker studies.
Berend Hoekman, Rainer Breitling, Frank Suits, Rainer Bischoff, Peter Horvatovich

Mol Cell Proteomics· June 2012

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Profiling and identification of cerebrospinal fluid proteins in a rat EAE model of multiple sclerosis.
Therese Rosenling, Marcel P Stoop, Amos Attali, Hans van Aken, Ernst Suidgeest, Frank Suits

J Proteome Res· April 2012

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The impact of delayed storage on the measured proteome and metabolome of human cerebrospinal fluid.
Therese Rosenling, Marcel P Stoop, Agnieszka Smolinska, Bas Muilwijk, Leon Coulier, Frank Suits

Clin Chem· December 2011

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Threshold-avoiding proteomics pipeline.
Frank Suits, Berend Hoekman, Therese Rosenling, Rainer Bischoff, Peter Horvatovich

Anal Chem· October 2011

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A high-throughput processing service for retention time alignment of complex proteomics and metabolomics LC-MS data.
Isthiaq Ahmad, Frank Suits, Berend Hoekman, Morris A Swertz, Heorhiy Byelas

Bioinformatics· April 2011

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Time alignment algorithms based on selected mass traces for complex LC-MS data.
Christin Christin, Huub C J Hoefsloot, Age K Smilde, Frank Suits, Rainer Bischoff

J Proteome Res· March 2010

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The effect of preanalytical factors on stability of the proteome and selected metabolites in cerebrospinal fluid (CSF).
Therese Rosenling, Christiaan L Slim, Christin Christin, Leon Coulier, Shanna Shi, Frank Suits

J Proteome Res· December 2009

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Optimized time alignment algorithm for LC-MS data: correlation optimized warping using component detection algorithm-selected mass chromatograms.
Christin Christin, Age K Smilde, Huub C J Hoefsloot, Frank Suits, Rainer Bischoff

Anal Chem· September 2008

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Two-dimensional method for time aligning liquid chromatography-mass spectrometry data.
Frank Suits, Jorge Lepre, Peicheng Du, Rainer Bischoff, Peter Horvatovich

Anal Chem· May 2008

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A noise model for mass spectrometry based proteomics.
Peicheng Du, Gustavo Stolovitzky, Peter Horvatovich, Rainer Bischoff, Jihyeon Lim, Frank Suits

Bioinformatics· April 2008

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Magnitude and spatial orientation of the hydrophobic moments of multi-domain proteins.
Ruhong Zhou, Ajay Royyuru, Prasanna Athma, Frank Suits,

Int J Bioinform Res Appl· January 2008

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Chip-LC-MS for label-free profiling of human serum.
Peter Horvatovich, Natalia I Govorukhina, Theo H Reijmers, Ate G J van der Zee, Frank Suits

Electrophoresis· December 2007

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The roaming atom pathway in formaldehyde decomposition.
Sridhar A Lahankar, Steven D Chambreau, Dave Townsend, Frank Suits, John Farnum, Arthur G Suits

J Chem Phys· July 2006

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Molecular dynamics investigation of the structural properties of phosphatidylethanolamine lipid bilayers.
Frank Suits, Michael C Pitman, Scott E Feller

J Chem Phys· June 2005

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Molecular dynamics investigation of dynamical properties of phosphatidylethanolamine lipid bilayers.
Michael C Pitman, Frank Suits, Klaus Gawrisch, Scott E Feller

J Chem Phys· June 2005

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Role of cholesterol and polyunsaturated chains in lipid-protein interactions: molecular dynamics simulation of rhodopsin in a realistic membrane environment.
Michael C Pitman, Alan Grossfield, Frank Suits, Scott E Feller

J Am Chem Soc· April 2005

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Molecular-level organization of saturated and polyunsaturated fatty acids in a phosphatidylcholine bilayer containing cholesterol.
Michael C Pitman, Frank Suits, Alexander D Mackerell, Scott E Feller

Biochemistry· December 2004

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