Publications by authors named "Fred Opperdoes"

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Evolutionary divergent kinetoplast genome structure and RNA editing patterns in the trypanosomatid .
Evgeny S Gerasimov, Dmitry A Afonin, Ingrid Škodová-Sveráková, Andreu Saura, Natália Trusina, Fred R Opperdoes

Proc Natl Acad Sci U S A· April 2025

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Blastocrithidia nonstop mitochondrial genome and its expression are remarkably insulated from nuclear codon reassignment.
Dmitry A Afonin, Evgeny S Gerasimov, Ingrid Škodová-Sveráková, Kristína Záhonová, Ondřej Gahura, Fred R Opperdoes

Nucleic Acids Res· April 2024

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In silico prediction of the metabolism of Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code.
Fred R Opperdoes, Kristína Záhonová, Ingrid Škodová-Sveráková, Barbora Bučková, Ľubomíra Chmelová

BMC Genomics· February 2024

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Subunit composition of mitochondrial dehydrogenase complexes in diplonemid flagellates.
Kristína Záhonová, Matus Valach, Pragya Tripathi, Corinna Benz, Fred R Opperdoes

Biochim Biophys Acta Gen Subj· September 2023

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Leishmania guyanensis M4147 as a new LRV1-bearing model parasite: Phosphatidate phosphatase 2-like protein controls cell cycle progression and intracellular lipid content.
Alexandra Zakharova, Amanda T S Albanaz, Fred R Opperdoes, Ingrid Škodová-Sveráková, Diana Zagirova

PLoS Negl Trop Dis· June 2022

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A New Model Trypanosomatid, : Genomic Perception of Its " Pandoraea novymonadis" Endosymbiont.
Alexandra Zakharova, Andreu Saura, Anzhelika Butenko, Lucie Podešvová, Sandra Warmusová, Fred R Opperdoes

mBio· August 2021

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Genome Analysis of and spp., Closest Phylogenetic Relatives of , Highlights the Role of Amastins in Shaping Pathogenicity.
Amanda T S Albanaz, Evgeny S Gerasimov, Jeffrey J Shaw, Jovana Sádlová, Julius Lukeš, Fred R Opperdoes

Genes (Basel)· March 2021

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The Remarkable Metabolism of : Genomic Predictions.
Fred R Opperdoes, Anzhelika Butenko, Alexandra Zakharova, Evgeny S Gerasimov, Sara L Zimmer

Pathogens· January 2021

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Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids.
Anzhelika Butenko, Fred R Opperdoes, Olga Flegontova, Aleš Horák, Vladimír Hampl

BMC Biol· March 2020

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Comparative genomics of Leishmania (Mundinia).
Anzhelika Butenko, Alexei Y Kostygov, Jovana Sádlová, Yuliya Kleschenko, Tomáš Bečvář, Fred R Opperdoes

BMC Genomics· October 2019

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Recent advances in trypanosomatid research: genome organization, expression, metabolism, taxonomy and evolution.
Dmitri A Maslov, Fred R Opperdoes, Alexei Y Kostygov, Hassan Hashimi, Julius Lukeš

Parasitology· January 2019

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Lipids Are the Preferred Substrate of the Protist Naegleria gruberi, Relative of a Human Brain Pathogen.
Michiel L Bexkens, Verena Zimorski, Maarten J Sarink, Hans Wienk, Jos F Brouwers, Fred R Opperdoes

Cell Rep· October 2018

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: Genomic insight into Parasite's Physiology.
Anzhelika Butenko, Tamara da Silva Vieira, Alexander O Frolov, Fred R Opperdoes, Rodrigo P Soares

Curr Genomics· February 2018

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Changes in the phosphoproteome of brown adipose tissue during hibernation in the ground squirrel, .
Gaëtan Herinckx, Nusrat Hussain, Fred R Opperdoes, Kenneth B Storey, Mark H Rider

Physiol Genomics· September 2017

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Molecular mechanisms of thermal resistance of the insect trypanosomatid Crithidia thermophila.
Aygul Ishemgulova, Anzhelika Butenko, Lucie Kortišová, Carolina Boucinha, Anastasiia Grybchuk-Ieremenko, Fred R Opperdoes

PLoS One· August 2017

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Nonstructural Protein L* Species Specificity Supports a Mouse Origin for Vilyuisk Human Encephalitis Virus.
Melissa Drappier, Fred R Opperdoes, Thomas Michiels

J Virol· July 2017

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Comparative Metabolism of Free-living Bodo saltans and Parasitic Trypanosomatids.
Fred R Opperdoes, Anzhelika Butenko, Pavel Flegontov, Vyacheslav Yurchenko, Julius Lukeš

J Eukaryot Microbiol· September 2016

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Genome of Leptomonas pyrrhocoris: a high-quality reference for monoxenous trypanosomatids and new insights into evolution of Leishmania.
Pavel Flegontov, Anzhelika Butenko, Sergei Firsov, Natalya Kraeva, Marek Eliáš, Fred R Opperdoes

Sci Rep· March 2016

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Leptomonas seymouri: Adaptations to the Dixenous Life Cycle Analyzed by Genome Sequencing, Transcriptome Profiling and Co-infection with Leishmania donovani.
Natalya Kraeva, Anzhelika Butenko, Jana Hlaváčová, Alexei Kostygov, Jitka Myškova, Fred Opperdoes

PLoS Pathog· August 2015

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TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei.
Sanu Shameer, Flora J Logan-Klumpler, Florence Vinson, Ludovic Cottret, Benjamin Merlet, Fred R Opperdoes

Nucleic Acids Res· January 2015

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Understanding the functional difference between growth arrest-specific protein 6 and protein S: an evolutionary approach.
Romain A Studer, Fred R Opperdoes, Gerry A F Nicolaes, André B Mulder, René Mulder

Open Biol· October 2014

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The streamlined genome of Phytomonas spp. relative to human pathogenic kinetoplastids reveals a parasite tailored for plants.
Betina M Porcel, France Denoeud, Fred Opperdoes, Benjamin Noel, Mohammed-Amine Madoui

PLoS Genet· February 2014

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Metabolic adaptations of Leishmania donovani in relation to differentiation, drug resistance, and drug pressure.
Maya Berg, Manu Vanaerschot, Andris Jankevics, Bart Cuypers, Ilse Maes, Fred Opperdoes

Mol Microbiol· October 2013

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Naegleria gruberi metabolism.
Fred R Opperdoes, Johan F De Jonckheere, Aloysius G M Tielens

Int J Parasitol· August 2011

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Comparative studies on the biochemical properties of the malic enzymes from Trypanosoma cruzi and Trypanosoma brucei.
Alejandro E Leroux, Dante A Maugeri, Fred R Opperdoes, Juan J Cazzulo, Cristina Nowicki

FEMS Microbiol Lett· January 2011

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