Publications by authors named "Gabriel D Victora"

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Nucleotide context models outperform protein language models for predicting antibody affinity maturation.
Mackenzie M Johnson, Kevin Sung, Hugh K Haddox, Ashni A Vora, Tatsuya Araki, Gabriel D Victora

PLoS Comput Biol· December 2025

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Distinct components of mRNA vaccines cooperate to instruct efficient germinal center responses.
Diana Castaño, Emily Bettini, Binod Kumar, Aleksey Chudnovskiy, Anna Siv, Gabriel D Victora

Cell· December 2025

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Nucleotide context models outperform protein language models for predicting antibody affinity maturation.
Mackenzie M Johnson, Kevin Sung, Hugh K Haddox, Ashni A Vora, Tatsuya Araki, Gabriel D Victora

bioRxiv· November 2025

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Identification of distinct cDC2 subpopulations that direct microbiota-specific T cell differentiation.
Shaina L Carroll, Andrew Ly, Ashley K Liu, Maria C C Canesso, Gabriel D Victora

bioRxiv· November 2025

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Antibody-mediated feedback modulates interclonal competition in the germinal center.
Alexandru Barbulescu, Jana Bilanovic, Tom Langelaar, A Katharina Teetz, Linas Urnavicius, Gabriel D Victora

bioRxiv· November 2025

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Pinpointing the anatomical site of antibody affinity maturation.
Gabriel D Victora

J Immunol· August 2025

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Inference of germinal center evolutionary dynamics via simulation-based deep learning.
Duncan K Ralph, Athanasios G Bakis, Jared Galloway, Ashni A Vora, Tatsuya Araki, Gabriel D Victora

ArXiv· August 2025

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Replaying germinal center evolution on a quantified affinity landscape.
William S DeWitt, Ashni A Vora, Tatsuya Araki, Jared G Galloway, Tanwee Alkutkar, Gabriel D Victora

bioRxiv· June 2025

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Transient silencing of hypermutation preserves B cell affinity during clonal bursting.
Juhee Pae, Niklas Schwan, Bertrand Ottino-Loffler, William S DeWitt, Amar Garg, Gabriel D Victora

Nature· May 2025

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Identification of antigen-presenting cell-T cell interactions driving immune responses to food.
Maria Cecilia Campos Canesso, Tiago Bruno Rezende de Castro, Sandra Nakandakari-Higa, Ainsley Lockhart, Julia Luehr, Gabriel D Victora

Science· March 2025

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Leveraging DAGs to improve context-sensitive and abundance-aware tree estimation.
Will Dumm, Duncan Ralph, William DeWitt, Ashni Vora, Tatsuya Araki, Gabriel D Victora

Philos Trans R Soc Lond B Biol Sci· February 2025

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Suppression of epithelial proliferation and tumourigenesis by immunoglobulin A.
Gregory P Donaldson, Gabriella L Reis, Marwa Saad, Christopher Wichmann, Izabela Mamede, Gabriel D Victora

bioRxiv· October 2024

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Mosaic sarbecovirus nanoparticles elicit cross-reactive responses in pre-vaccinated animals.
Alexander A Cohen, Jennifer R Keeffe, Ariën Schiepers, Sandra E Dross, Allison J Greaney, Gabriel D Victora

Cell· October 2024

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Proximity-dependent labeling identifies dendritic cells that drive the tumor-specific CD4 T cell response.
Aleksey Chudnovskiy, Tiago B R Castro, Sandra Nakandakari-Higa, Ang Cui, Chia-Hao Lin, Gabriel D Victora

Sci Immunol· October 2024

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Glycosphingolipid synthesis mediates immune evasion in KRAS-driven cancer.
Mariluz Soula, Gokhan Unlu, Rachel Welch, Aleksey Chudnovskiy, Beste Uygur, Gabriel D Victora

Nature· September 2024

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Opposing effects of pre-existing antibody and memory T cell help on the dynamics of recall germinal centers.
Ariën Schiepers, Marije F L Van't Wout, Alvaro Hobbs, Luka Mesin, Gabriel D Victora

Immunity· July 2024

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Mosaic sarbecovirus nanoparticles elicit cross-reactive responses in pre-vaccinated animals.
Alexander A Cohen, Jennifer R Keeffe, Ariën Schiepers, Sandra E Dross, Allison J Greaney, Gabriel D Victora

bioRxiv· May 2024

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Distinct components of nucleoside-modified messenger RNA vaccines cooperate to instruct efficient germinal center responses.
Emily Bettini, Aleksey Chudnovskiy, Giulia Protti, Sandra Nakadakari-Higa, Simona Ceglia, Gabriel D Victora

bioRxiv· May 2024

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Universal recording of immune cell interactions in vivo.
Sandra Nakandakari-Higa, Sarah Walker, Maria C C Canesso, Verena van der Heide, Aleksey Chudnovskiy, Gabriel D Victora

Nature· March 2024

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Opposing effects of pre-existing antibody and memory T cell help on the dynamics of recall germinal centers.
Ariën Schiepers, Marije F L van 't Wout, Alvaro Hobbs, Luka Mesin, Gabriel D Victora

bioRxiv· December 2023

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Pan-sarbecovirus prophylaxis with human anti-ACE2 monoclonal antibodies.
Fengwen Zhang, Jesse Jenkins, Renan V H de Carvalho, Sandra Nakandakari-Higa, Teresia Chen, Gabriel D Victora

Nat Microbiol· June 2023

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Universal recording of cell-cell contacts for interaction-based transcriptomics.
Sandra Nakandakari-Higa, Maria C C Canesso, Sarah Walker, Aleksey Chudnovskiy, Johanne T Jacobsen, Gabriel D Victora

bioRxiv· April 2023

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Molecular fate-mapping of serum antibody responses to repeat immunization.
Ariën Schiepers, Marije F L van 't Wout, Allison J Greaney, Trinity Zang, Hiromi Muramatsu, Gabriel D Victora

Nature· March 2023

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Monitoring the Interaction Between Dendritic Cells and T Cells In Vivo with LIPSTIC.
Giulia Pasqual, Aleksey Chudnovskiy, Gabriel D Victora

Methods Mol Biol· March 2023

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mutation yields supercompetitive B cells primed for malignant transformation.
Coraline Mlynarczyk, Matt Teater, Juhee Pae, Christopher R Chin, Ling Wang, Gabriel D Victora

Science· January 2023

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