Publications by authors named "Gavin J D Smith"

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Seroprevalence of Nipah virus and related paramyxoviruses in native frugivorous bats, Luzon, Philippines.
Marana S Rekedal, Mary-Glazel Noroña, Jairue Azel P Café, Neil Mittal, Sophie A Borthwick, Gavin J D Smith

Emerg Microbes Infect· December 2025

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Egocentric characterisation of the swine trade network in Cambodia and implications for disease surveillance and control.
William T M Leung, Guillaume Fournié, Phalla Miech, Ty Chhay, Arata Hidano, Gavin J D Smith

Prev Vet Med· November 2025

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Rapid Emergence and Evolution of SARS-CoV-2 Intrahost Variants among COVID-19 Patients with Prolonged Infections, Singapore.
Yvonne C F Su, Michael A Zeller, Peter Cronin, Rong Zhang, Yan Zhuang, Gavin J D Smith

Emerg Infect Dis· August 2025

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Serologic Evidence of Human Exposure to Bat-Borne Zoonotic Paramyxoviruses, Cambodia.
Neil Mittal, Spencer L Sterling, Phireak Hip, Dolyce H W Low, Piseth Ly, Gavin J D Smith

Viruses· August 2025

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Hybrid genome assembly of the widespread bat Rhinolophus lepidus provides insights into susceptibility to SARS-CoV-2 infection and climate change threat.
Kritika M Garg, Dolyce H W Low, Geraldine Lee, Benjamin P Y-H Lee, Ian H Mendenhall, Gavin J D Smith

DNA Res· May 2025

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Author Correction: Pathogen genomic surveillance status among lower resource settings in Asia.
Marya Getchell, Suci Wulandari, Ruklanthi de Alwis, Shreya Agoramurthy, Yoong Khean Khoo, Gavin J D Smith

Nat Microbiol· January 2025

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Transmission of Swine Influenza A Viruses along Pig Value Chains, Cambodia, 2020-2022.
Arata Hidano, Dina Koeut, Hannah Holt, William T M Leung, Sokhom Krean, Gavin J D Smith

Emerg Infect Dis· December 2024

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Spatiotemporal evolution and transmission dynamics of Alpha and Delta SARS-CoV-2 variants contributing to sequential outbreaks in Cambodia during 2021.
Yvonne C F Su, Michael A Zeller, Tey Putita Ou, Jordan Ma, Leakhena Pum, Gavin J D Smith

Commun Med (Lond)· November 2024

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Application of a bespoke monoclonal antibody panel to characterize immune cell populations in cave nectar bats.
Shiwei Chen, Wan Rong Sia, Leon J W Tang, Akshamal M Gamage, Wharton O Y Chan, Gavin J D Smith

Cell Rep· October 2024

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Pathogen genomic surveillance status among lower resource settings in Asia.
Marya Getchell, Suci Wulandari, Ruklanthi de Alwis, Shreya Agoramurthy, Yoong Khean Khoo, Gavin J D Smith

Nat Microbiol· October 2024

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Discordant phylodynamic and spatiotemporal transmission patterns driving the long-term persistence and evolution of human coronaviruses.
Marcus G Mah, Michael A Zeller, Rong Zhang, Yan Zhuang, Venance P Maro, Gavin J D Smith

Npj Viruses· October 2024

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Application of a bespoke monoclonal antibody panel to characterize immune cell populations in cave nectar bats.
Shiwei Chen, Wan Rong Sia, Leon J W Tang, Akshamal M Gamage, Wharton O Y Chan, Gavin J D Smith

Cell Rep· September 2024

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Nation-wide surveillance of ticks (Acari: Argasidae) on bats (Chiroptera) in Singapore.
Mackenzie L Kwak, Alan T Hitch, Dolyce H W Low, Sophie A Borthwick, Greg Markowsky, Gavin J D Smith

Acta Trop· August 2024

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GeneRaMeN enables integration, comparison, and meta-analysis of multiple ranked gene lists to identify consensus, unique, and correlated genes.
Meisam Yousefi, Wayne Ren See, Kam Leng Aw-Yong, Wai Suet Lee, Cythia Lingli Yong, Gavin J D Smith

Brief Bioinform· July 2024

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Betacoronaviruses SARS-CoV-2 and HCoV-OC43 infections in IGROV-1 cell line require aryl hydrocarbon receptor.
Meisam Yousefi, Wai Suet Lee, Wharton O Y Chan, Wei He, Marcus G Mah, Gavin J D Smith

Emerg Microbes Infect· December 2023

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Evolution and ecology of Jeilongvirus among wild rodents and shrews in Singapore.
Lena Ch'ng, Dolyce H W Low, Sophie A Borthwick, Rong Zhang, Zoe A Ong, Gavin J D Smith

One Health Outlook· December 2023

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Advancing pathogen genomics in resource-limited settings.
Paul Michael Pronyk, Ruklanthi de Alwis, Rebecca Rockett, Kerri Basile, Yann Felix Boucher, Gavin J D Smith

Cell Genom· December 2023

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Host, season, habitat and climatic factors as drivers of Asian rodent tick (Ixodes granulatus) (Acari: Ixodidae) occurrence and abundance in Southeast Asia.
Mackenzie L Kwak, Alan T Hitch, Sophie A Borthwick, Dolyce H W Low, Greg Markowsky, Gavin J D Smith

Acta Trop· October 2023

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The genomic landscape of swine influenza A viruses in Southeast Asia.
Michael A Zeller, Jordan Ma, Foong Ying Wong, Sothyra Tum, Arata Hidano, Gavin J D Smith

Proc Natl Acad Sci U S A· August 2023

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Spike-Independent Infection of Human Coronavirus 229E in Bat Cells.
Marcus G Mah, Martin Linster, Dolyce H W Low, Yan Zhuang, Jayanthi Jayakumar, Gavin J D Smith

Microbiol Spectr· June 2023

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Cencurut virus: A novel from Asian house shrews () in Singapore.
Dolyce H W Low, Lena Ch'ng, Yvonne C F Su, Martin Linster, Rong Zhang, Gavin J D Smith

One Health· June 2023

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Determinants of influenza and pneumococcal vaccine uptake among preschool children in Singapore.
Marina Zahari, Vittoria Offeddu, Gavin J D Smith, Clarence C Tam

PLoS One· May 2023

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Genomic epidemiology of SARS-CoV-2 in Cambodia, January 2020 to February 2021.
Yvonne C F Su, Jordan Z J Ma, Tey Putita Ou, Leakhena Pum, Sidonn Krang, Gavin J D Smith

Virus Evol· December 2022

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Co-circulation of alpha- and beta-coronaviruses in Pteropus vampyrus flying foxes from Indonesia.
Lena Ch'ng, Susan M Tsang, Zoe A Ong, Dolyce H W Low, Sigit Wiantoro, Ina L Smith, Gavin J D Smith

Transbound Emerg Dis· November 2022

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TMEM41B and VMP1 modulate cellular lipid and energy metabolism for facilitating dengue virus infection.
Meisam Yousefi, Wai Suet Lee, Biaoguo Yan, Liang Cui, Cythia Lingli Yong, Gavin J D Smith

PLoS Pathog· August 2022

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