Publications by authors named "Geet Duggal"

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Salmon provides fast and bias-aware quantification of transcript expression.
Rob Patro, Geet Duggal, Michael I Love, Rafael A Irizarry, Carl Kingsford

Nat Methods· April 2017

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Deconvolution of Ensemble Chromatin Interaction Data Reveals the Latent Mixing Structures in Cell Subpopulations.
Emre Sefer, Geet Duggal, Carl Kingsford

J Comput Biol· June 2016

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Identification of alternative topological domains in chromatin.
Darya Filippova, Rob Patro, Geet Duggal, Carl Kingsford

Algorithms Mol Biol· May 2014

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Higher-order chromatin domains link eQTLs with the expression of far-away genes.
Geet Duggal, Hao Wang, Carl Kingsford

Nucleic Acids Res· January 2014

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Resolving spatial inconsistencies in chromosome conformation measurements.
Geet Duggal, Rob Patro, Emre Sefer, Hao Wang, Darya Filippova

Algorithms Mol Biol· March 2013

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Graph rigidity reveals well-constrained regions of chromosome conformation embeddings.
Geet Duggal, Carl Kingsford

BMC Bioinformatics· September 2012

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Interpreting patterns of gene expression: signatures of coregulation, the data processing inequality, and triplet motifs.
Wai Lim Ku, Geet Duggal, Yuan Li, Michelle Girvan, Edward Ott

PLoS One· July 2012

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