Publications by authors named "Geraldine Pascal"

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The Diversity of Oligosaccharide Composition in Rabbit Milk and Its Association with the Development of the Cecal Microbiota and the Survival of Young Rabbits.
Sylvie Combes, Christelle Knudsen, Mathilde Rumeau, Géraldine Pascal, Laurent Cauquil

J Nutr· December 2025

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Nested PCR to optimize metabarcoding for low-concentration and host-associated bacterial DNA.
Laëtitia Leclerc, Gabryelle Agoutin, Thierry Brévault, Antony Champion, Jean Mainguy, Géraldine Pascal

Microbiol Spectr· September 2025

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Structure-dependent degradation of milk oligosaccharides by newly isolated intestinal commensal bacterial strains from suckling piglets and rabbits.
Mathilde Rumeau, Sead Chadi, Frederic Pepke, Martin Beaumont, Cláudia M Vicente, Géraldine Pascal

BMC Microbiol· August 2025

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The bacterial faecal microbiota shifts during the transition period in dairy cows.
Lisa Arnalot, Géraldine Pascal, Laurent Cauquil, Elise Vanbergue, Gilles Foucras

Anim Microbiome· July 2025

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Building a reliable 16S mini-barcode library of wild bees from Occitania, south-west of France.
Anaïs Marquisseau, Kamila Canale-Tabet, Emmanuelle Labarthe, Géraldine Pascal, Christophe Klopp

Biodivers Data J· January 2025

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A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses.
Ali Hakimzadeh, Alejandro Abdala Asbun, Davide Albanese, Maria Bernard, Dominik Buchner, Géraldine Pascal

Mol Ecol Resour· July 2024

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A multi-omics dataset of the response to early plant polysaccharide ingestion in rabbits.
Charlotte Paës, Martin Beaumont, Thierry Gidenne, Karine Bébin, Joël Duperray, Géraldine Pascal

Sci Data· June 2024

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Relationship between feed efficiency and gut microbiota in laying chickens under contrasting feeding conditions.
Maria Bernard, Alexandre Lecoeur, Jean-Luc Coville, Nicolas Bruneau, Deborah Jardet, Géraldine Pascal

Sci Rep· April 2024

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A large database linking the rumen bacterial composition and milk traits in Lacaune sheep.
Guillermo Martinez Boggio, Christel Marie-Etancelin, Jean-Marie Menras, Regis Tomas, Marie-Luce Chemit, Géraldine Pascal

Sci Data· January 2023

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A carvacrol-based product reduces Campylobacter jejuni load and alters microbiota composition in the caeca of chickens.
Marion Allaoua, Elsa Bonnafé, Pierre Etienne, Virginie Noirot, Jean-François Gabarrou, Géraldine Pascal

J Appl Microbiol· June 2022

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Early Introduction of Plant Polysaccharides Drives the Establishment of Rabbit Gut Bacterial Ecosystems and the Acquisition of Microbial Functions.
Charlotte Paës, Thierry Gidenne, Karine Bébin, Joël Duperray, Charly Gohier, Géraldine Pascal

mSystems· June 2022

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FROGS: a powerful tool to analyse the diversity of fungi with special management of internal transcribed spacers.
Maria Bernard, Olivier Rué, Mahendra Mariadassou, Géraldine Pascal

Brief Bioinform· November 2021

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Apart From the Diet, the Ruminal Microbiota of Lambs Is Modified in Relation to Their Genetic Potential for Feed Efficiency or Feeding Behavior.
Christel Marie-Etancelin, Flavie Tortereau, Beatrice Gabinaud, Guillermo Martinez Boggio, Quentin Le Graverand, Géraldine Pascal

Front Microbiol· October 2021

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Gut Microbiota-Derived Metabolite Signature in Suckling and Weaned Piglets.
Martin Beaumont, Laurent Cauquil, Allan Bertide, Ingrid Ahn, Céline Barilly, Géraldine Pascal

J Proteome Res· January 2021

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The intestinal microbial composition in Greylag geese differs with steatosis induction mode: spontaneous or induced by overfeeding.
Christelle Knudsen, Julien Arroyo, Maxime Even, Laurent Cauquil, Géraldine Pascal

Anim Microbiome· January 2021

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Culture of rabbit caecum organoids by reconstituting the intestinal stem cell niche in vitro with pharmacological inhibitors or L-WRN conditioned medium.
Eloïse Mussard, Cécile Pouzet, Virginie Helies, Géraldine Pascal, Sandra Fourre

Stem Cell Res· October 2020

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Dietary composition and yeast/microalgae combination supplementation modulate the microbial ecosystem in the caecum, colon and faeces of horses.
Pauline Grimm, Sylvie Combes, Géraldine Pascal, Laurent Cauquil, Véronique Julliand

Br J Nutr· February 2020

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Diversity and Co-occurrence Pattern Analysis of Cecal Microbiota Establishment at the Onset of Solid Feeding in Young Rabbits.
Tehya Read, Laurence Fortun-Lamothe, Géraldine Pascal, Malo Le Boulch, Laurent Cauquil

Front Microbiol· May 2019

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The MACADAM database: a MetAboliC pAthways DAtabase for Microbial taxonomic groups for mining potential metabolic capacities of archaeal and bacterial taxonomic groups.
Malo Le Boulch, Patrice Déhais, Sylvie Combes, Géraldine Pascal

Database (Oxford)· January 2019

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Fumonisin-Exposure Impairs Age-Related Ecological Succession of Bacterial Species in Weaned Pig Gut Microbiota.
Ivan Mateos, Sylvie Combes, Géraldine Pascal, Laurent Cauquil, Céline Barilly

Toxins (Basel)· June 2018

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FROGS: Find, Rapidly, OTUs with Galaxy Solution.
Frédéric Escudié, Lucas Auer, Maria Bernard, Mahendra Mariadassou, Laurent Cauquil, Géraldine Pascal

Bioinformatics· April 2018

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Probiotics Strains Modulate Gut Microbiota and Lipid Metabolism in Mule Ducks.
Maxime Even, Stéphane Davail, Mikael Rey, Annabelle Tavernier, Marianne Houssier, Géraldine Pascal

Open Microbiol J· April 2018

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Phylogenesis and Biological Characterization of a New Glucose Transporter in the Chicken (Gallus gallus), GLUT12.
Edouard Coudert, Géraldine Pascal, Joëlle Dupont, Jean Simon, Estelle Cailleau-Audouin

PLoS One· June 2016

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Evolutionary origin of bone morphogenetic protein 15 and growth and differentiation factor 9 and differential selective pressure between mono- and polyovulating species.
Olivier Monestier, Bertrand Servin, Sylvain Auclair, Thomas Bourquard, Anne Poupon, Géraldine Pascal

Biol Reprod· October 2014

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Positive selection in bone morphogenetic protein 15 targets a natural mutation associated with primary ovarian insufficiency in human.
Sylvain Auclair, Raffaella Rossetti, Camille Meslin, Olivier Monestier, Elisa Di Pasquale, Géraldine Pascal

PLoS One· June 2014

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