Publications by authors named "Gilberto L Thomas"

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Transcriptogram analysis reveals relationship between viral titer and gene sets responses during Corona-virus infection.
Rita M C de Almeida, Gilberto L Thomas, James A Glazier

NAR Genom Bioinform· March 2022

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Exact solution for the Anisotropic Ornstein-Uhlenbeck process.
Rita M C de Almeida, Guilherme S Y Giardini, Mendeli Vainstein, James A Glazier, Gilberto L Thomas

Physica A· February 2022

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Transcriptogram analysis reveals relationship between viral titer and gene sets responses during Corona-virus infection.
Rita M C de Almeida, Gilberto L Thomas, James A Glazier

bioRxiv· February 2021

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CompuCell3D Simulations Reproduce Mesenchymal Cell Migration on Flat Substrates.
Ismael Fortuna, Gabriel C Perrone, Monique S Krug, Eduarda Susin, Julio M Belmonte, Gilberto L Thomas

Biophys J· June 2020

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Emergent Stratification in Solid Tumors Selects for Reduced Cohesion of Tumor Cells: A Multi-Cell, Virtual-Tissue Model of Tumor Evolution Using CompuCell3D.
Maciej H Swat, Gilberto L Thomas, Abbas Shirinifard, Sherry G Clendenon, James A Glazier

PLoS One· March 2016

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3D simulations of wet foam coarsening evidence a self similar growth regime.
Gilberto L Thomas, Julio M Belmonte, François Graner, James A Glazier, Rita M C de Almeida

Colloids Surf A Physicochem Eng Asp· May 2015

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Multi-scale modeling of tissues using CompuCell3D.
Maciej H Swat, Gilberto L Thomas, Julio M Belmonte, Abbas Shirinifard, Dimitrij Hmeljak

Methods Cell Biol· July 2012

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Growth laws and self-similar growth regimes of coarsening two-dimensional foams: transition from dry to wet limits.
Ismael Fortuna, Gilberto L Thomas, Rita M C de Almeida, François Graner

Phys Rev Lett· June 2012

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Computer simulations of cell sorting due to differential adhesion.
Ying Zhang, Gilberto L Thomas, Maciej Swat, Abbas Shirinifard, James A Glazier

PLoS One· February 2012

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Self-propelled particle model for cell-sorting phenomena.
Julio M Belmonte, Gilberto L Thomas, Leonardo G Brunnet, Rita M C de Almeida, Hugues Chaté

Phys Rev Lett· June 2008

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Coarsening of three-dimensional grains in crystals, or bubbles in dry foams, tends towards a universal, statistically scale-invariant regime.
Gilberto L Thomas, R M C de Almeida, F Graner

Phys Rev E Stat Nonlin Soft Matter Phys· August 2006

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Interplay between activator-inhibitor coupling and cell-matrix adhesion in a cellular automaton model for chondrogenic patterning.
Maria A Kiskowski, Mark S Alber, Gilberto L Thomas, James A Glazier, Natalie B Bronstein

Dev Biol· July 2004

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