Publications by authors named "Giovanni Scala"

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MiDNE a tool for Multi-omics genes and drugs interactions discovery.
Aurora Brandi, Barbara Majello, Ines Simeone, Massimiliano Romano, Michele Ceccarelli, Giovanni Scala

Comput Struct Biotechnol J· November 2025

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Targeting the 8-oxodG Base Excision Repair Pathway for Cancer Therapy.
Anna Piscone, Francesca Gorini, Susanna Ambrosio, Anna Noviello, Giovanni Scala

Cells· January 2025

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Bioactive Hydrogel Supplemented with Stromal Cell-Derived Extracellular Vesicles Enhance Wound Healing.
Matteo Galbiati, Fabio Maiullari, Maria Grazia Ceraolo, Salma Bousselmi, Nicole Fratini, Giovanni Scala

Pharmaceutics· January 2025

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Protective role of cells and spores of Shouchella clausii SF174 against fructose-induced gut dysfunctions in small and large intestine.
Anella Saggese, Valentina Barrella, Angela Di Porzio, Antonio Dario Troise, Andrea Scaloni, Giovanni Scala

J Nutr Biochem· November 2024

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Author Correction: Targeted inhibition of ubiquitin signaling reverses metabolic reprogramming and suppresses glioblastoma growth.
Rossella Delle Donne, Rosa Iannucci, Laura Rinaldi, Luca Roberto, Maria A Oliva, Giovanni Scala

Commun Biol· October 2024

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MoNETA: MultiOmics Network Embedding for SubType Analysis.
Giovanni Scala, Luigi Ferraro, Aurora Brandi, Yan Guo, Barbara Majello

NAR Genom Bioinform· September 2024

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Mitochondrial metabolism and neuroinflammation in the cerebral cortex and cortical synapses of rats: effect of milk intake through DNA methylation.
Giovanna Trinchese, Antonia Feola, Gina Cavaliere, Fabiano Cimmino, Angela Catapano, Giovanni Scala

J Nutr Biochem· June 2024

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Accumulation of 8-oxodG within the human mitochondrial genome positively associates with transcription.
Giovanni Scala, Susanna Ambrosio, Margherita Menna, Francesca Gorini, Carmen Caiazza

NAR Genom Bioinform· December 2023

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Phylogenomics of species and analysis of antimicrobial resistance genes.
Antonella Migliaccio, James Bray, Michele Intoccia, Maria Stabile, Giovanni Scala

Front Microbiol· October 2023

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Guadecitabine plus ipilimumab in unresectable melanoma: five-year follow-up and integrated multi-omic analysis in the phase 1b NIBIT-M4 trial.
Teresa Maria Rosaria Noviello, Anna Maria Di Giacomo, Francesca Pia Caruso, Alessia Covre, Roberta Mortarini, Giovanni Scala

Nat Commun· September 2023

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MOViDA: multiomics visible drug activity prediction with a biologically informed neural network model.
Luigi Ferraro, Giovanni Scala, Luigi Cerulo, Emanuele Carosati, Michele Ceccarelli

Bioinformatics· July 2023

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A screening test proposal for congenital defects based on maternal serum metabolomics profile.
Jacopo Troisi, Martina Lombardi, Giovanni Scala, Pierpaolo Cavallo, Rennae S Tayler

Am J Obstet Gynecol· March 2023

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Reprogramming of the gut microbiota following feralization in Sus scrofa.
Simona Petrelli, Maria Buglione, Eleonora Rivieccio, Ezio Ricca, Loredana Baccigalupi, Giovanni Scala

Anim Microbiome· February 2023

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Placental Metabolomics of Fetal Growth Restriction.
Jacopo Troisi, Steven J K Symes, Martina Lombardi, Pierpaolo Cavallo, Angelo Colucci, Giovanni Scala

Metabolites· February 2023

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On the Fidelity Robustness of CHSH-Bell Inequality via Filtered Random States.
Antonio Mandarino, Giovanni Scala

Entropy (Basel)· January 2023

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What is Nonclassical about Uncertainty Relations?
Lorenzo Catani, Matthew Leifer, Giovanni Scala, David Schmid, Robert W Spekkens

Phys Rev Lett· December 2022

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MC profiling: a novel approach to analyze DNA methylation heterogeneity in genome-wide bisulfite sequencing data.
Giulia De Riso, Antonella Sarnataro, Giovanni Scala, Mariella Cuomo, Rosa Della Monica

NAR Genom Bioinform· December 2022

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OxiDIP-Seq for Genome-wide Mapping of Damaged DNA Containing 8-Oxo-2'-Deoxyguanosine.
Francesca Gorini, Giovanni Scala, Susanna Ambrosio, Barbara Majello, Stefano Amente

Bio Protoc· November 2022

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A novel workflow for the qualitative analysis of DNA methylation data.
Antonella Sarnataro, Giulia De Riso, Sergio Cocozza, Antonio Pezone, Barbara Majello, Giovanni Scala

Comput Struct Biotechnol J· October 2022

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The Metabolomic Approach for the Screening of Endometrial Cancer: Validation from a Large Cohort of Women Scheduled for Gynecological Surgery.
Jacopo Troisi, Antonio Mollo, Martina Lombardi, Giovanni Scala, Sean M Richards

Biomolecules· September 2022

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Targeted inhibition of ubiquitin signaling reverses metabolic reprogramming and suppresses glioblastoma growth.
Rossella Delle Donne, Rosa Iannucci, Laura Rinaldi, Luca Roberto, Maria A Oliva, Giovanni Scala

Commun Biol· August 2022

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8-oxodG accumulation within super-enhancers marks fragile CTCF-mediated chromatin loops.
Giovanni Scala, Francesca Gorini, Susanna Ambrosio, Andrea M Chiariello, Mario Nicodemi

Nucleic Acids Res· April 2022

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Integrated Network Pharmacology Approach for Drug Combination Discovery: A Multi-Cancer Case Study.
Antonio Federico, Michele Fratello, Giovanni Scala, Lena Möbus, Alisa Pavel

Cancers (Basel)· April 2022

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Nextcast: A software suite to analyse and model toxicogenomics data.
Angela Serra, Laura Aliisa Saarimäki, Alisa Pavel, Giusy Del Giudice, Michele Fratello, Giovanni Scala

Comput Struct Biotechnol J· March 2022

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A Metabolomics-Based Screening Proposal for Colorectal Cancer.
Jacopo Troisi, Maria Tafuro, Martina Lombardi, Giovanni Scala, Sean M Richards

Metabolites· January 2022

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