Publications by authors named "Haim Wolfson"

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Discriminating physiological from non-physiological interfaces in structures of protein complexes: A community-wide study.
Hugo Schweke, Qifang Xu, Gerardo Tauriello, Lorenzo Pantolini, Torsten Schwede, Haim J Wolfson

Proteomics· September 2023

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EvoRator2: Predicting Site-specific Amino Acid Substitutions Based on Protein Structural Information Using Deep Learning.
Natan Nagar, Jérôme Tubiana, Gil Loewenthal, Haim J Wolfson, Nir Ben Tal

J Mol Biol· July 2023

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Funneling modulatory peptide design with generative models: Discovery and characterization of disruptors of calcineurin protein-protein interactions.
Jérôme Tubiana, Lucia Adriana-Lifshits, Michael Nissan, Matan Gabay, Inbal Sher, Haim J Wolfson

PLoS Comput Biol· February 2023

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Pep-Whisperer: Inhibitory peptide design.
Naama Hurwitz, Daniel Zaidman, Haim J Wolfson

Proteins· November 2022

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ScanNet: A Web Server for Structure-based Prediction of Protein Binding Sites with Geometric Deep Learning.
Jérôme Tubiana, Dina Schneidman-Duhovny, Haim J Wolfson

J Mol Biol· October 2022

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Reduced B cell antigenicity of Omicron lowers host serologic response.
Jérôme Tubiana, Yufei Xiang, Li Fan, Haim J Wolfson, Kong Chen

Cell Rep· October 2022

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ScanNet: an interpretable geometric deep learning model for structure-based protein binding site prediction.
Jérôme Tubiana, Dina Schneidman-Duhovny, Haim J Wolfson

Nat Methods· June 2022

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Reduced antigenicity of Omicron lowers host serologic response.
Jérôme Tubiana, Yufei Xiang, Li Fan, Haim J Wolfson, Kong Chen

bioRxiv· February 2022

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Memdock: An α-Helical Membrane Protein Docking Algorithm.
Naama Hurwitz, Haim J Wolfson

Methods Mol Biol· August 2021

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Modeling of Multimolecular Complexes.
Dina Schneidman-Duhovny, Haim J Wolfson

Methods Mol Biol· January 2021

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Design of Disruptors of the Hsp90-Cdc37 Interface.
Ilda D'Annessa, Naama Hurwitz, Valentina Pirota, Giovanni Luca Beretta, Stella Tinelli, Haim Wolfson

Molecules· January 2020

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Protein-Peptide Interaction Design: PepCrawler and PinaColada.
Daniel Zaidman, Haim J Wolfson

Methods Mol Biol· February 2018

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SnapDock-template-based docking by Geometric Hashing.
Michael Estrin, Haim J Wolfson

Bioinformatics· July 2017

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PinaColada: peptide-inhibitor ant colony ad-hoc design algorithm.
Daniel Zaidman, Haim J Wolfson

Bioinformatics· August 2016

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Memdock: an α-helical membrane protein docking algorithm.
Naama Hurwitz, Dina Schneidman-Duhovny, Haim J Wolfson

Bioinformatics· August 2016

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DockStar: a novel ILP-based integrative method for structural modeling of multimolecular protein complexes.
Naama Amir, Dan Cohen, Haim J Wolfson

Bioinformatics· September 2015

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Novel LIMK2 Inhibitor Blocks Panc-1 Tumor Growth in a mouse xenograft model.
Roni Rak, Roni Haklai, Galit Elad-Tzfadia, Haim J Wolfson, Shmuel Carmeli

Oncoscience· January 2015

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Blind prediction of interfacial water positions in CAPRI.
Marc F Lensink, Iain H Moal, Paul A Bates, Panagiotis L Kastritis, Adrien S J Melquiond, Haim J Wolfson

Proteins· April 2014

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Diameter-selective dispersion of carbon nanotubes by β-lactoglobulin whey protein.
Faina Karchemsky, Eyal Drug, Efrat Mashiach-Farkash, Ludmila Fadeev, Haim J Wolfson

Colloids Surf B Biointerfaces· December 2013

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Conformational transitions in human translin enable nucleic acid binding.
Laura Pérez-Cano, Elad Eliahoo, Keren Lasker, Haim J Wolfson, Fabian Glaser

Nucleic Acids Res· November 2013

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Structure-based in silico identification of ubiquitin-binding domains provides insights into the ALIX-V:ubiquitin complex and retrovirus budding.
Tal Keren-Kaplan, Ilan Attali, Michael Estrin, Lillian S Kuo, Efrat Farkash, Haim J Wolfson

EMBO J· February 2013

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Computer-based identification of a novel LIMK1/2 inhibitor that synergizes with salirasib to destabilize the actin cytoskeleton.
Efrat Mashiach-Farkash, Roni Rak, Galit Elad-Sfadia, Roni Haklai, Shmuel Carmeli, Haim J Wolfson

Oncotarget· June 2012

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ParaDock: a flexible non-specific DNA--rigid protein docking algorithm.
Itamar Banitt, Haim J Wolfson

Nucleic Acids Res· November 2011

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PepCrawler: a fast RRT-based algorithm for high-resolution refinement and binding affinity estimation of peptide inhibitors.
Elad Donsky, Haim J Wolfson

Bioinformatics· October 2011

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MultiFit: a web server for fitting multiple protein structures into their electron microscopy density map.
Elina Tjioe, Keren Lasker, Ben Webb, Haim J Wolfson, Andrej Sali

Nucleic Acids Res· July 2011

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