Publications by authors named "Hammad Naveed"

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GSLAlign: community detection and local PPI network alignment.
Umair Ayub, Hammad Naveed

J Biomol Struct Dyn· May 2025

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Identification of additional mechanistically important residues in the multidrug transporter styMdtM of Typhi.
Aqsa Shaheen, Anam Tariq, Fouzia Ismat, Hammad Naveed, Rita De Zorzi

J Biomol Struct Dyn· November 2024

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Toward interpretable and generalized mitosis detection in digital pathology using deep learning.
Hasan Farooq, Saira Saleem, Iffat Aleem, Ayesha Iftikhar, Umer Nisar Sheikh, Hammad Naveed

Digit Health· May 2024

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Low-Cost Histopathological Mitosis Detection for Microscope-acquired Images.
Bilal Shabbir, Saira Saleem, Iffat Aleem, Nida Babar, Hammad Farooq, Hammad Naveed

AMIA Jt Summits Transl Sci Proc· May 2024

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Masked Language Modeling for Resource Constrained Biological Natural Language Processing.
Haasha Bin Atif, Hamza Alvi, Hammad Naveed

Annu Int Conf IEEE Eng Med Biol Soc· July 2023

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3D-BMPP: 3D Beta-Barrel Membrane Protein Predictor.
Wei Tian, Meishan Lin, Ke Tang, Manisha Barse, Hammad Naveed

Methods Mol Biol· March 2023

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Computational prediction of disease related lncRNAs using machine learning.
Razia Khalid, Hammad Naveed, Zoya Khalid

Sci Rep· January 2023

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Medical terminology-based computing system: a lightweight post-processing solution for out-of-vocabulary multi-word terms.
Nadia Saeed, Hammad Naveed

Front Mol Biosci· August 2022

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BioAlign: An Accurate Global PPI Network Alignment Algorithm.
Umair Ayub, Hammad Naveed

Evol Bioinform Online· July 2022

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GOntoSim: a semantic similarity measure based on LCA and common descendants.
Amna Binte Kamran, Hammad Naveed

Sci Rep· March 2022

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Identification of destabilizing SNPs in SARS-CoV2-ACE2 protein and spike glycoprotein: implications for virus entry mechanisms.
Zoya Khalid, Hammad Naveed

J Biomol Struct Dyn· February 2022

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Identifying Novel Drug Targets by iDTPnd: A Case Study of Kinase Inhibitors.
Hammad Naveed, Corinna Reglin, Thomas Schubert, Xin Gao, Stefan T Arold

Genomics Proteomics Bioinformatics· December 2021

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A Generic Approach for Classification of Psychological Disorders Diagnosis using EEG.
Talha Anwar, Naeem Rehmat, Hammad Naveed

Annu Int Conf IEEE Eng Med Biol Soc· November 2021

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Computational Prediction of lncRNA-Protein Interactions using Machine learning.
Muhammad Mushtaq, Hammad Naveed, Zoya Khalid

Annu Int Conf IEEE Eng Med Biol Soc· November 2021

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Role of Cell Morphology in Classical Delta-Notch Pattern Formation.
Sana Saleh, Mukhtar Ullah, Hammad Naveed

Annu Int Conf IEEE Eng Med Biol Soc· November 2021

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Cell fate determination is influenced by Notch heterogeneity.
Sana Saleh, Mukhtar Ullah, Hammad Naveed

Annu Int Conf IEEE Eng Med Biol Soc· November 2021

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A hierarchical deep learning based approach for multi-functional enzyme classification.
Kinaan Aamir Khan, Safyan Aman Memon, Hammad Naveed

Protein Sci· September 2021

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Leveraging digital media data for pharmacovigilance.
Hammad Farooq, Junaid Suhail Niaz, Saira Fakhar, Hammad Naveed

AMIA Annu Symp Proc· June 2021

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PMNet: A probability map based scaled network for breast cancer diagnosis.
Salman Ahmed, Maria Tariq, Hammad Naveed

Comput Med Imaging Graph· April 2021

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HECNet: a hierarchical approach to enzyme function classification using a Siamese Triplet Network.
Safyan Aman Memon, Kinaan Aamir Khan, Hammad Naveed

Bioinformatics· November 2020

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SAlign-a structure aware method for global PPI network alignment.
Umair Ayub, Imran Haider, Hammad Naveed

BMC Bioinformatics· November 2020

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Identification of potential inhibitors of three key enzymes of SARS-CoV2 using computational approach.
Hafsa Iftikhar, Hafiza Nayyer Ali, Sadia Farooq, Hammad Naveed, Syed Shahzad-Ul-Hussan

Comput Biol Med· July 2020

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Predicting the pathogenicity of protein coding mutations using Natural Language Processing.
Naeem Rehmat, Hammad Farooq, Sanjay Kumar, Sibt Ul Hussain, Hammad Naveed

Annu Int Conf IEEE Eng Med Biol Soc· July 2020

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The structure of the TOM core complex in the mitochondrial outer membrane.
Thomas Bausewein, Hammad Naveed, Jie Liang, Stephan Nussberger

Biol Chem· May 2020

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GeTFEP: A general transfer free energy profile of transmembrane proteins.
Wei Tian, Hammad Naveed, Meishan Lin, Jie Liang

Protein Sci· February 2020

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