Publications by authors named "Henner Simianer"

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Optimization of recurrent rapid cycle breeding in maize for sustained long-term genetic improvement via stochastic simulations.
Torsten Pook, Mila Leonie Tost, Henner Simianer

G3 (Bethesda)· July 2025

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Analysis of different genotyping and selection strategies in laying hen breeding programs.
Lisa Büttgen, Henner Simianer, Torsten Pook

Genet Sel Evol· April 2025

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Optimization of breeding program design through stochastic simulation with evolutionary algorithms.
Azadeh Hassanpour, Johannes Geibel, Henner Simianer, Antje Rohde, Torsten Pook

G3 (Bethesda)· January 2025

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Genomic analysis of three medieval parchments from German monasteries.
Felix Heinrich, Henner Simianer, Jörg Bölling, Hedwig Röckelein, Christian Roos

Sci Rep· January 2025

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Genomic evidence for the suitability of Göttingen Minipigs with a rare seizure phenotype as a model for human epilepsy.
Pardis Najafi, Christian Reimer, Jonathan D Gilthorpe, Kirsten R Jacobsen, Maja Ramløse, Henner Simianer

Neurogenetics· April 2024

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Optimization of breeding program design through stochastic simulation with kernel regression.
Azadeh Hassanpour, Johannes Geibel, Henner Simianer, Torsten Pook

G3 (Bethesda)· December 2023

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How economic weights translate into genetic and phenotypic progress, and vice versa.
Henner Simianer, Johannes Heise, Stefan Rensing, Torsten Pook, Johannes Geibel

Genet Sel Evol· June 2023

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Genomic prediction using information across years with epistatic models and dimension reduction via haplotype blocks.
Elaheh Vojgani, Armin C Hölker, Manfred Mayer, Chris-Carolin Schön, Henner Simianer

PLoS One· April 2023

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Ghat: an R package for identifying adaptive polygenic traits.
Medhat Mahmoud, Mila Tost, Ngoc-Thuy Ha, Henner Simianer, Timothy Beissinger

G3 (Bethesda)· February 2023

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Fourth Report on Chicken Genes and Chromosomes 2022.
Jacqueline Smith, James M Alfieri, Nick Anthony, Peter Arensburger, Giridhar N Athrey, Henner Simianer

Cytogenet Genome Res· January 2023

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learnMET: an R package to apply machine learning methods for genomic prediction using multi-environment trial data.
Cathy C Westhues, Henner Simianer, Timothy M Beissinger

G3 (Bethesda)· November 2022

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Epigenetic Regulation of Phenotypic Sexual Plasticity Inducing Skewed Sex Ratio in Zebrafish.
Shahrbanou Hosseini, Nares Trakooljul, Marc Hirschfeld, Klaus Wimmers, Henner Simianer

Front Cell Dev Biol· July 2022

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Assessment of linkage disequilibrium patterns between structural variants and single nucleotide polymorphisms in three commercial chicken populations.
Johannes Geibel, Nora Paulina Praefke, Steffen Weigend, Henner Simianer, Christian Reimer

BMC Genomics· March 2022

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Increasing calling accuracy, coverage, and read-depth in sequence data by the use of haplotype blocks.
Torsten Pook, Adnane Nemri, Eric Gerardo Gonzalez Segovia, Daniel Valle Torres, Henner Simianer

PLoS Genet· December 2021

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Prediction of Maize Phenotypic Traits With Genomic and Environmental Predictors Using Gradient Boosting Frameworks.
Cathy C Westhues, Gregory S Mahone, Sofia da Silva, Patrick Thorwarth, Malthe Schmidt, Henner Simianer

Front Plant Sci· November 2021

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Accounting for epistasis improves genomic prediction of phenotypes with univariate and bivariate models across environments.
Elaheh Vojgani, Torsten Pook, Johannes W R Martini, Armin C Hölker, Manfred Mayer, Henner Simianer

Theor Appl Genet· September 2021

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How array design creates SNP ascertainment bias.
Johannes Geibel, Christian Reimer, Steffen Weigend, Annett Weigend, Torsten Pook, Henner Simianer

PLoS One· August 2021

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In Silico Prediction of Transcription Factor Collaborations Underlying Phenotypic Sexual Dimorphism in Zebrafish ().
Shahrbanou Hosseini, Armin Otto Schmitt, Jens Tetens, Bertram Brenig, Henner Simianer

Genes (Basel)· June 2021

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Genotypic and Dietary Effects on Egg Quality of Local Chicken Breeds and Their Crosses Fed with Faba Beans.
Tanja Nolte, Simon Jansen, Steffen Weigend, Daniel Moerlein, Ingrid Halle, Henner Simianer

Animals (Basel)· June 2021

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How imputation can mitigate SNP ascertainment Bias.
Johannes Geibel, Christian Reimer, Torsten Pook, Steffen Weigend, Annett Weigend, Henner Simianer

BMC Genomics· May 2021

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Phenotype Prediction Under Epistasis.
Elaheh Vojgani, Torsten Pook, Henner Simianer

Methods Mol Biol· April 2021

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Genetic diversity in global chicken breeds in relation to their genetic distances to wild populations.
Dorcus Kholofelo Malomane, Steffen Weigend, Armin Otto Schmitt, Annett Weigend, Christian Reimer, Henner Simianer

Genet Sel Evol· April 2021

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Harvest Moon: Some personal thoughts on past and future directions in animal breeding research.
Henner Simianer

J Anim Breed Genet· March 2021

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MoBPSweb: A web-based framework to simulate and compare breeding programs.
Torsten Pook, Lisa Büttgen, Amudha Ganesan, Ngoc-Thuy Ha, Henner Simianer

G3 (Bethesda)· February 2021

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COVID-19: a "black swan" and what animal breeding can learn from it.
Henner Simianer, Christian Reimer

Anim Front· January 2021

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