Publications by authors named "Hitoshi Onouchi"

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Ribosome stalling-induced NIP5;1 mRNA decay triggers ARGONAUTE1-dependent transcription downregulation.
Mayuki Tanaka, Naoyuki Sotta, Susan Duncan, Yukako Chiba, Hitoshi Onouchi

Nucleic Acids Res· February 2025

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Phylogeny-linked occurrence of ribosome stalling on the mRNAs of Arabidopsis unfolded protein response factor bZIP60 orthologs in divergent plant species.
Tomoya Imamichi, Nao Kusumoto, Haruka Aoyama, Seidai Takamatsu, Yugo Honda, Hitoshi Onouchi

Nucleic Acids Res· May 2024

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In vitro co-expression chromatin assembly and remodeling platform for plant histone variants.
Petra Banko, Kei-Ichi Okimune, Szilvia K Nagy, Akinori Hamasaki, Ryo Morishita, Hitoshi Onouchi

Sci Rep· January 2024

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Upstream open reading frame-mediated upregulation of ANAC082 expression in response to nucleolar stress in Arabidopsis.
Shun Sasaki, Toru Murakami, Miharu Yasumuro, Ayaka Makita, Yutaro Oi, Hitoshi Onouchi

Plant Biotechnol (Tokyo)· March 2023

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Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels.
Yuta Hiragori, Hiro Takahashi, Taihei Karino, Atsushi Kaido, Noriya Hayashi, Hitoshi Onouchi

Plant Mol Biol· January 2023

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De novo reconstitution of chromatin using wheat germ cell-free protein synthesis.
Yaeta Endo, Nobuaki Takemori, Szilvia K Nagy, Kei-Ichi Okimune, Rohinton Kamakaka, Hitoshi Onouchi

FEBS Open Bio· June 2021

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Exhaustive identification of conserved upstream open reading frames with potential translational regulatory functions from animal genomes.
Hiro Takahashi, Shido Miyaki, Hitoshi Onouchi, Taichiro Motomura, Nobuo Idesako

Sci Rep· October 2020

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Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA.
Hiro Takahashi, Noriya Hayashi, Yuta Hiragori, Shun Sasaki, Taichiro Motomura, Hitoshi Onouchi

BMC Genomics· March 2020

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Reverse genetics-based biochemical studies of the ribosomal exit tunnel constriction region in eukaryotic ribosome stalling: spatial allocation of the regulatory nascent peptide at the constriction.
Seidai Takamatsu, Yubun Ohashi, Noriyuki Onoue, Yoko Tajima, Tomoya Imamichi, Hitoshi Onouchi

Nucleic Acids Res· February 2020

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Boron-Dependent Translational Suppression of the Borate Exporter Contributes to the Avoidance of Boron Toxicity.
Izumi Aibara, Tatsuya Hirai, Koji Kasai, Junpei Takano, Hitoshi Onouchi

Plant Physiol· June 2018

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Identification of Arabidopsis thaliana upstream open reading frames encoding peptide sequences that cause ribosomal arrest.
Noriya Hayashi, Shun Sasaki, Hiro Takahashi, Yui Yamashita, Satoshi Naito, Hitoshi Onouchi

Nucleic Acids Res· September 2017

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The Minimum Open Reading Frame, AUG-Stop, Induces Boron-Dependent Ribosome Stalling and mRNA Degradation.
Mayuki Tanaka, Naoyuki Sotta, Yusuke Yamazumi, Yui Yamashita, Kyoko Miwa, Hitoshi Onouchi

Plant Cell· November 2016

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A U-system approach for predicting metabolic behaviors and responses based on an alleged metabolic reaction network.
Kansuporn Sriyudthsak, Yuji Sawada, Yukako Chiba, Yui Yamashita, Shigehiko Kanaya, Hitoshi Onouchi

BMC Syst Biol· September 2015

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Once-weekly trelagliptin versus daily alogliptin in Japanese patients with type 2 diabetes: a randomised, double-blind, phase 3, non-inferiority study.
Nobuya Inagaki, Hitoshi Onouchi, Hideaki Maezawa, Shingo Kuroda, Kohei Kaku

Lancet Diabetes Endocrinol· March 2015

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Identification of novel Arabidopsis thaliana upstream open reading frames that control expression of the main coding sequences in a peptide sequence-dependent manner.
Isao Ebina, Mariko Takemoto-Tsutsumi, Shun Watanabe, Hiroaki Koyama, Yayoi Endo, Hitoshi Onouchi

Nucleic Acids Res· February 2015

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The N-terminal cleavable pre-sequence encoded in the first exon of cystathionine γ-synthase contains two different functional domains for chloroplast targeting and regulation of gene expression.
Yuka Hagiwara-Komoda, Tomoya Sugiyama, Yui Yamashita, Hitoshi Onouchi, Satoshi Naito

Plant Cell Physiol· October 2014

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A halt in poly(A) shortening during S-adenosyl-L-methionine-induced translation arrest in CGS1 mRNA of Arabidopsis thaliana.
Yui Yamashita, Ingrid Lambein, Soko Kobayashi, Hitoshi Onouchi, Yukako Chiba

Genes Genet Syst· September 2014

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Polyamine-responsive ribosomal arrest at the stop codon of an upstream open reading frame of the AdoMetDC1 gene triggers nonsense-mediated mRNA decay in Arabidopsis thaliana.
Naoko Uchiyama-Kadokura, Karin Murakami, Mariko Takemoto, Naoto Koyanagi, Katsunori Murota, Hitoshi Onouchi

Plant Cell Physiol· September 2014

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Ribosomes in a stacked array: elucidation of the step in translation elongation at which they are stalled during S-adenosyl-L-methionine-induced translation arrest of CGS1 mRNA.
Yui Yamashita, Yoshitomo Kadokura, Naoyuki Sotta, Toru Fujiwara, Ichigaku Takigawa, Hitoshi Onouchi

J Biol Chem· May 2014

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SYR-472, a novel once-weekly dipeptidyl peptidase-4 (DPP-4) inhibitor, in type 2 diabetes mellitus: a phase 2, randomised, double-blind, placebo-controlled trial.
Nobuya Inagaki, Hitoshi Onouchi, Hiroki Sano, Nobuo Funao, Shingo Kuroda

Lancet Diabetes Endocrinol· February 2014

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SS-mPMG and SS-GA: tools for finding pathways and dynamic simulation of metabolic networks.
Tetsuo Katsuragi, Naoaki Ono, Keiichi Yasumoto, Md Altaf-Ul-Amin, Masami Y Hirai, Hitoshi Onouchi

Plant Cell Physiol· May 2013

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Changes in mRNA stability associated with cold stress in Arabidopsis cells.
Yukako Chiba, Katsuhiko Mineta, Masami Y Hirai, Yuya Suzuki, Shigehiko Kanaya, Hitoshi Onouchi

Plant Cell Physiol· February 2013

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BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome.
Hiro Takahashi, Anna Takahashi, Satoshi Naito, Hitoshi Onouchi

Bioinformatics· September 2012

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Boron-dependent degradation of NIP5;1 mRNA for acclimation to excess boron conditions in Arabidopsis.
Mayuki Tanaka, Junpei Takano, Yukako Chiba, Fabien Lombardo, Yuki Ogasawara, Hitoshi Onouchi

Plant Cell· September 2011

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Arabidopsis cell-free extract, ACE, a new in vitro translation system derived from Arabidopsis callus cultures.
Katsunori Murota, Yuka Hagiwara-Komoda, Keisuke Komoda, Hitoshi Onouchi, Masayuki Ishikawa

Plant Cell Physiol· August 2011

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