Publications by authors named "Huashui Ai"

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Nine high-quality Anas genomes provide insights into Anas evolution and domestication.
Zhou Zhang, Zijia Ni, Te Li, Mengfei Ning, Chuze Gao, Huashui Ai

Cell Rep· April 2025

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Assessing the relationship between the gut microbiota and growth traits in Chinese indigenous pig breeds.
Mengqing Zhou, Lin Wu, Xiao Sun, Min Liu, Yaxiang Wang, Huashui Ai

BMC Vet Res· April 2025

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Genomic and transcriptomic insights into vitamin A-induced thermogenesis and gene reuse as a cold adaptation strategy in wild boars.
Mingpeng Zhang, Aleksei Traspov, Jiawen Yang, Min Zheng, Veronika R Kharzinova, Huashui Ai

Commun Biol· January 2025

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Comprehensive lung microbial gene and genome catalogs assist the mechanism survey of strains causing pig lung lesions.
Jingquan Li, Fei Huang, Yunyan Zhou, Tao Huang, Xinkai Tong, Huashui Ai

Imeta· December 2024

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Whole-genome sequences restore the original classification of dabbling ducks (genus Anas).
Zhou Zhang, Huashui Ai, Lusheng Huang

Genet Sel Evol· May 2024

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Tracing the Dynamical Genetic Diversity Changes of Russian Livni Pigs during the Last 50 Years with the Museum, Old, and Modern Samples.
Alexandra A Abdelmanova, Tatiana E Deniskova, Veronika R Kharzinova, Roman Yu Chinarov, Oksana I Boronetskaya, Huashui Ai

Animals (Basel)· May 2024

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Metagenomic sequencing reveals swine lung microbial communities and metagenome-assembled genomes associated with lung lesions-a pilot study.
Jingquan Li, Tao Huang, Mingpeng Zhang, Xinkai Tong, Jiaqi Chen, Huashui Ai

Int Microbiol· November 2023

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Characterization of the pig lower respiratory tract antibiotic resistome.
Yunyan Zhou, Jingquan Li, Fei Huang, Huashui Ai, Jun Gao

Nat Commun· August 2023

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Accurate haplotype construction and detection of selection signatures enabled by high quality pig genome sequences.
Xinkai Tong, Dong Chen, Jianchao Hu, Shiyao Lin, Ziqi Ling, Huashui Ai

Nat Commun· August 2023

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Genetic architecture for skeletal muscle glycolytic potential in Chinese Erhualian pigs revealed by a genome-wide association study using 1.4M SNP array.
Xinke Xie, Cong Huang, Yizhong Huang, Xiaoxiao Zou, Runxin Zhou, Huashui Ai

Front Genet· March 2023

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Revisiting the Evolutionary History of Pigs via De Novo Mutation Rate Estimation in A Three-generation Pedigree.
Mingpeng Zhang, Qiang Yang, Huashui Ai, Lusheng Huang

Genomics Proteomics Bioinformatics· December 2022

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A further look at quantitative trait loci for growth and fatness traits in a White Duroc × Erhualian F intercross population.
Zheng Deng, Tao Huang, Guorong Yan, Bin Yang, Zhiyan Zhang, Huashui Ai

Anim Biotechnol· November 2022

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ABO genotype alters the gut microbiota by regulating GalNAc levels in pigs.
Hui Yang, Jinyuan Wu, Xiaochang Huang, Yunyan Zhou, Yifeng Zhang, Xinkai Tong, Huashui Ai

Nature· June 2022

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Scan of the endogenous retrovirus sequences across the swine genome and survey of their copy number variation and sequence diversity among various Chinese and Western pig breeds.
Jia-Qi Chen, Ming-Peng Zhang, Xin-Kai Tong, Jing-Quan Li, Zhou Zhang, Hua-Shui Ai

Zool Res· May 2022

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Human-Mediated Admixture and Selection Shape the Diversity on the Modern Swine (Sus scrofa) Y Chromosomes.
Huashui Ai, Mingpeng Zhang, Bin Yang, Amy Goldberg, Wanbo Li

Mol Biol Evol· October 2021

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Four genetic loci affecting swine lung lesions identified by whole-genome sequencing-based association studies.
Xinkai Tong, Tao Huang, Mingpeng Zhang, Jiaqi Chen, Zhou Zhang, Huashui Ai

Sci China Life Sci· September 2021

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A worldwide map of swine short tandem repeats and their associations with evolutionary and environmental adaptations.
Zhongzi Wu, Huanfa Gong, Mingpeng Zhang, Xinkai Tong, Huashui Ai

Genet Sel Evol· April 2021

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A large-scale comparison of meat quality and intramuscular fatty acid composition among three Chinese indigenous pig breeds.
Yizhong Huang, Lisheng Zhou, Junjie Zhang, Xianxian Liu, Yifeng Zhang, Liping Cai, Huashui Ai

Meat Sci· October 2020

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Impacts of Mycoplasma loads and lung lesions on immune and hematological statuses of pigs in an eight-breed cross heterogeneous population.
Qing Zhang, Jing Li, Tao Huang, Yifeng Zhang, Wenwu Xu, Huashui Ai

J Anim Sci· August 2020

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The fine-scale genetic structure and selection signals of Chinese indigenous pigs.
Min Huang, Bin Yang, Hao Chen, Hui Zhang, Zhongping Wu, Huashui Ai

Evol Appl· February 2020

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Landscape of Loci and Candidate Genes for Muscle Fatty Acid Composition in Pigs Revealed by Multiple Population Association Analysis.
Junjie Zhang, Yifeng Zhang, Huanfa Gong, Leilei Cui, Junwu Ma, Huashui Ai

Front Genet· October 2019

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Genome-wide association and evolutionary analyses reveal the formation of swine facial wrinkles in Chinese Erhualian pigs.
Tao Huang, Mingpeng Zhang, Guorong Yan, Xiaochang Huang, Hao Chen, Huashui Ai

Aging (Albany NY)· July 2019

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Genetic correlation of fatty acid composition with growth, carcass, fat deposition and meat quality traits based on GWAS data in six pig populations.
Yifeng Zhang, Junjie Zhang, Huanfa Gong, Leilei Cui, Wanchang Zhang, Huashui Ai

Meat Sci· April 2019

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Microbial communities in swine lungs and their association with lung lesions.
Tao Huang, Mingpeng Zhang, Xinkai Tong, Jiaqi Chen, Guorong Yan, Huashui Ai

Microb Biotechnol· March 2019

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New insights into host adaptation to swine respiratory disease revealed by genetic differentiation and RNA sequencing analyses.
Mingpeng Zhang, Tao Huang, Xiaochang Huang, Xinkai Tong, Jiaqi Chen, Huashui Ai

Evol Appl· March 2019

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