Publications by authors named "Hyuntae Na"

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Coarse-Graining Waters: Unveiling The Effective Hydrophilicity/Hydrophobicity of Individual Protein Atoms and The Roles of Waters' Hydrogens.
Hyuntae Na, Guang Song

J Chem Theory Comput· October 2023

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Towards a free energy-based elastic network model and its application to the SARS-COV2 binding to ACE2.
Hyuntae Na, Guang Song

Phys Biol· May 2023

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An efficient algorithm calculating common solvent accessible volume.
In Jung Kim, Hyuntae Na

PLoS One· May 2022

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The amounts of thermal vibrations and static disorder in protein X-ray crystallographic B-factors.
Hyuntae Na, Konrad Hinsen, Guang Song

Proteins· November 2021

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Effect of solvent on protein structure and dynamics.
Anshuman Bose Majumdar, In Jung Kim, Hyuntae Na

Phys Biol· April 2020

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Slow normal modes of proteins are accurately reproduced across different platforms.
Hyuntae Na, Daniel Ben-Avraham, Monique M Tirion

Phys Biol· November 2018

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All-atom normal mode dynamics of HIV-1 capsid.
Hyuntae Na, Guang Song

PLoS Comput Biol· September 2018

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Fast Normal Mode Computations of Capsid Dynamics Inspired by Resonance.
Hyuntae Na, Guang Song

Phys Biol· March 2018

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Predicting the functional motions of p97 using symmetric normal modes.
Hyuntae Na, Guang Song

Proteins· December 2016

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The effective degeneracy of protein normal modes.
Hyuntae Na, Guang Song

Phys Biol· May 2016

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Universality of vibrational spectra of globular proteins.
Hyuntae Na, Guang Song, Daniel ben-Avraham

Phys Biol· February 2016

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Bridging between NMA and Elastic Network Models: Preserving All-Atom Accuracy in Coarse-Grained Models.
Hyuntae Na, Robert L Jernigan, Guang Song

PLoS Comput Biol· October 2015

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The performance of fine-grained and coarse-grained elastic network models and its dependence on various factors.
Hyuntae Na, Guang Song

Proteins· July 2015

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Quantitative delineation of how breathing motions open ligand migration channels in myoglobin and its mutants.
Hyuntae Na, Guang Song

Proteins· April 2015

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Conventional NMA as a better standard for evaluating elastic network models.
Hyuntae Na, Guang Song

Proteins· February 2015

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Bridging between normal mode analysis and elastic network models.
Hyuntae Na, Guang Song

Proteins· September 2014

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A natural unification of GNM and ANM and the role of inter-residue forces.
Hyuntae Na, Guang Song

Phys Biol· June 2014

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Generalized spring tensor models for protein fluctuation dynamics and conformation changes.
Hyuntae Na, Tu-Liang Lin, Guang Song

Adv Exp Med Biol· May 2014

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