Publications by authors named "Ignacio Ibarra"

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Charting the single-cell and spatial landscape of IDH-wild-type glioblastoma with GBmap.
Cristian Ruiz-Moreno, Sergio Marco Salas, Erik Samuelsson, Mariia Minaeva, Ignacio Ibarra

Neuro Oncol· October 2025

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Active repression of cell fate plasticity by PROX1 safeguards hepatocyte identity and prevents liver tumorigenesis.
Bryce Lim, Aryan Kamal, Borja Gomez Ramos, Juan M Adrian Segarra, Ignacio L Ibarra

Nat Genet· March 2025

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Considerations for building and using integrated single-cell atlases.
Karin Hrovatin, Lisa Sikkema, Vladimir A Shitov, Graham Heimberg, Maiia Shulman, Ignacio L Ibarra

Nat Methods· January 2025

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APOBEC2 safeguards skeletal muscle cell fate through binding chromatin and regulating transcription of non-muscle genes during myoblast differentiation.
J Paulo Lorenzo, Linda Molla, Elias Moris Amro, Ignacio L Ibarra, Sandra Ruf

Proc Natl Acad Sci U S A· April 2024

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Integrated multi-omics single cell atlas of the human retina.
Jin Li, Jun Wang, Ignacio L Ibarra, Xuesen Cheng, Malte D Luecken

Res Sq· November 2023

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Predicting cellular responses to complex perturbations in high-throughput screens.
Mohammad Lotfollahi, Anna Klimovskaia Susmelj, Carlo De Donno, Leon Hetzel, Yuge Ji, Ignacio L Ibarra

Mol Syst Biol· June 2023

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An integrated cell atlas of the lung in health and disease.
Lisa Sikkema, Ciro Ramírez-Suástegui, Daniel C Strobl, Tessa E Gillett, Luke Zappia, Ignacio L Ibarra

Nat Med· June 2023

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MYT1L haploinsufficiency in human neurons and mice causes autism-associated phenotypes that can be reversed by genetic and pharmacologic intervention.
Bettina Weigel, Jana F Tegethoff, Sarah D Grieder, Bryce Lim, Bhuvaneswari Nagarajan, Ignacio L Ibarra

Mol Psychiatry· May 2023

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Comparative chromatin accessibility upon BDNF stimulation delineates neuronal regulatory elements.
Ignacio L Ibarra, Vikram S Ratnu, Lucia Gordillo, In-Young Hwang, Luca Mariani

Mol Syst Biol· August 2022

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Parkinson's disease motor symptoms rescue by CRISPRa-reprogramming astrocytes into GABAergic neurons.
Jessica Giehrl-Schwab, Florian Giesert, Benedict Rauser, Chu Lan Lao, Sina Hembach, Ignacio L Ibarra

EMBO Mol Med· May 2022

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Consensus in acute myeloid leukemia in Mexico.
Luara L Arana-Luna, Martha Alvarado-Ibarra, Luis G Silva-Michel, Adrián Morales-Maravilla, María Del C González-Rubio, Gregorio Ignacio-Ibarra

Gac Med Mex· March 2022

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Squidpy: a scalable framework for spatial omics analysis.
Giovanni Palla, Hannah Spitzer, Michal Klein, David Fischer, Anna Christina Schaar, Ignacio L Ibarra

Nat Methods· February 2022

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Ruxolitinib as a treatment strategy for SARS-CoV-2 pneumonia: clinical experience in a real-world setting.
Roberto Ovilla-Martinez, Xochitl Cota-Rangel, Jose De La Peña-Celaya, Mariana Alejandra Alvarado-Zepeda, Alejandro Jiménez Sastré, Gregorio Ignacio Ibarra

J Infect Dev Ctries· January 2022

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Analysis of the quality of anticoagulation with vitamin K antagonists in three clinical scenarios in Mexico.
Patricia Gómez-Rosas, Miguel Á Sosa-Velázquez, Lesly A Yáñez-Funes, José J González-Trejo, Karim Majluf-Cruz, Gregorio Ignacio-Ibarra

Gac Med Mex· December 2021

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SARS-CoV-2 infection triggers profibrotic macrophage responses and lung fibrosis.
Daniel Wendisch, Oliver Dietrich, Tommaso Mari, Saskia von Stillfried, Ignacio L Ibarra

Cell· December 2021

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Mexican Concensus of Multiple Myeloma.
José A de la Peña-Celaya, Jocelyn Aguilar-Luevano, Luisa Ma Alcivar-Cedeño, José L Álvarez-Vera, Irene Anaya-Cuellar, Gregorio Ignacio-Ibarra, Martha Alvarado-Ibarra

Gac Med Mex· October 2021

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A proposal for the management of COVID-19-induced coagulopathy in adults.
Gregorio Ignacio-Ibarra, Ma Teresa García-Lee, Ana I González-Ávila, Jaime García-Chávez, Laura Guzmán-Chores

Gac Med Mex· July 2021

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Mechanistic insights into transcription factor cooperativity and its impact on protein-phenotype interactions.
Ignacio L Ibarra, Nele M Hollmann, Bernd Klaus, Sandra Augsten, Britta Velten

Nat Commun· January 2020

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Prevalence and Clinical Significance of FLT3 Mutation Status in Acute Myeloid Leukemia Patients: A Multicenter Study.
Jorge Cuervo-Sierra, José Carlos Jaime-Pérez, Ramón A Martínez-Hernández, Ricardo D García-Sepúlveda, Mónica Sánchez-Cárdenas, Gregorio Ignacio-Ibarra

Arch Med Res· April 2016

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Efficient and automated large-scale detection of structural relationships in proteins with a flexible aligner.
Fernando I Gutiérrez, Felipe Rodriguez-Valenzuela, Ignacio L Ibarra, Damien P Devos, Francisco Melo

BMC Bioinformatics· January 2016

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[Capacity of the legal framework of public health institutions in Mexico to support their functional integration].
Ignacio Ibarra, Gabriel Martínez, Nelly Aguilera, Emanuel Orozco, Germán E Fajardo-Dolci

Salud Publica Mex· July 2014

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Myringoplasties in children: our results.
Olalla Castro, Adela María Pérez-Carro, Ignacio Ibarra, Miriam Hamdan, J Manuel Meléndez

Acta Otorrinolaringol Esp· May 2014

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Ventricular assist device as a bridge to transplant, and extracorporeal membrane oxygenation for primary graft failure in a child with hemophilia A.
Manuel Ángel Frías, Susana Jaraba, Ignacio Ibarra, María José Arroyo, María José Velasco

Pediatr Crit Care Med· November 2011

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Interactive software tool to comprehend the calculation of optimal sequence alignments with dynamic programming.
Ignacio L Ibarra, Francisco Melo

Bioinformatics· July 2010

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Leishmaniasis and concurrent hemophagocytosis with or without transient perforin expression perturbation.
Manuel Santamaría, Juan Carrillo, Juan Pérez-Navero, Elena Mateos, Ignacio Ibarra

Pediatr Blood Cancer· August 2008

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