Publications by authors named "Ignacio Medina"

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Whole-exome sequencing and Drosophila modelling reveal mutated genes and pathways contributing to human ovarian failure.
Ismael Henarejos-Castillo, Francisco José Sanz, Cristina Solana-Manrique, Patricia Sebastian-Leon, Ignacio Medina

Reprod Biol Endocrinol· December 2024

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Association between Different Modes of Travelling and Adiposity in Chilean Population: Findings from the Chilean National Health Survey 2016-2017.
Ignacio Medina, Fanny Petermann-Rocha, Heather Waddell, Ximena Díaz-Martínez, Carlos Matus-Castillo

Int J Environ Res Public Health· May 2020

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PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources.
Daniel Perez-Gil, Francisco J Lopez, Joaquin Dopazo, Pablo Marin-Garcia, Augusto Rendon, Ignacio Medina

BMC Bioinformatics· March 2019

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VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy.
José M Juanes, Asunción Gallego, Joaquín Tárraga, Felipe J Chaves, Pablo Marín-Garcia, Ignacio Medina

BMC Bioinformatics· September 2017

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HGVA: the Human Genome Variation Archive.
Javier Lopez, Jacobo Coll, Matthias Haimel, Swaathi Kandasamy, Joaquin Tarraga, Ignacio Medina

Nucleic Acids Res· July 2017

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Web-based network analysis and visualization using CellMaps.
Francisco Salavert, Luz García-Alonso, Rubén Sánchez, Roberto Alonso, Marta Bleda, Ignacio Medina

Bioinformatics· October 2016

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Concurrent and Accurate Short Read Mapping on Multicore Processors.
Héctor Martínez, Joaquín Tárraga, Ignacio Medina, Sergio Barrachina, Maribel Castillo

IEEE/ACM Trans Comput Biol Bioinform· July 2016

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Actionable pathways: interactive discovery of therapeutic targets using signaling pathway models.
Francisco Salavert, Marta R Hidago, Alicia Amadoz, Cankut Çubuk, Ignacio Medina

Nucleic Acids Res· July 2016

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HPG pore: an efficient and scalable framework for nanopore sequencing data.
Joaquin Tarraga, Asunción Gallego, Vicente Arnau, Ignacio Medina, Joaquin Dopazo

BMC Bioinformatics· February 2016

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Identification of epistatic interactions through genome-wide association studies in sporadic medullary and juvenile papillary thyroid carcinomas.
Berta Luzón-Toro, Marta Bleda, Elena Navarro, Luz García-Alonso, Macarena Ruiz-Ferrer, Ignacio Medina

BMC Med Genomics· December 2015

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A parallel and sensitive software tool for methylation analysis on multicore platforms.
Joaquín Tárraga, Mariano Pérez, Juan M Orduña, José Duato, Ignacio Medina

Bioinformatics· October 2015

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Assessing the impact of mutations found in next generation sequencing data over human signaling pathways.
Rosa D Hernansaiz-Ballesteros, Francisco Salavert, Patricia Sebastián-León, Alejandro Alemán, Ignacio Medina

Nucleic Acids Res· July 2015

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Babelomics 5.0: functional interpretation for new generations of genomic data.
Roberto Alonso, Francisco Salavert, Francisco Garcia-Garcia, Jose Carbonell-Caballero, Marta Bleda, Ignacio Medina

Nucleic Acids Res· July 2015

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The European Genome-phenome Archive of human data consented for biomedical research.
Ilkka Lappalainen, Jeff Almeida-King, Vasudev Kumanduri, Alexander Senf, John Dylan Spalding, Ignacio Medina

Nat Genet· July 2015

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Fast inexact mapping using advanced tree exploration on backward search methods.
José Salavert, Andrés Tomás, Joaquín Tárraga, Ignacio Medina, Joaquín Dopazo

BMC Bioinformatics· January 2015

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Acceleration of short and long DNA read mapping without loss of accuracy using suffix array.
Joaquín Tárraga, Vicente Arnau, Héctor Martínez, Raul Moreno, Diego Cazorla, Ignacio Medina

Bioinformatics· December 2014

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A map of human microRNA variation uncovers unexpectedly high levels of variability.
José Carbonell, Eva Alloza, Pablo Arce, Salud Borrego, Javier Santoyo, Ignacio Medina

Genome Med· August 2014

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A web-based interactive framework to assist in the prioritization of disease candidate genes in whole-exome sequencing studies.
Alejandro Alemán, Francisco Garcia-Garcia, Francisco Salavert, Ignacio Medina, Joaquín Dopazo

Nucleic Acids Res· July 2014

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A web tool for the design and management of panels of genes for targeted enrichment and massive sequencing for clinical applications.
Alejandro Alemán, Francisco Garcia-Garcia, Ignacio Medina, Joaquín Dopazo

Nucleic Acids Res· July 2014

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Genome Maps, a new generation genome browser.
Ignacio Medina, Francisco Salavert, Rubén Sanchez, Alejandro de Maria, Roberto Alonso

Nucleic Acids Res· July 2013

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Inferring the functional effect of gene expression changes in signaling pathways.
Patricia Sebastián-León, José Carbonell, Francisco Salavert, Rubén Sanchez, Ignacio Medina

Nucleic Acids Res· July 2013

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Select your SNPs (SYSNPs): a web tool for automatic and massive selection of SNPs.
Belén Lorente-Galdos, Ignacio Medina, Carlos Morcillo-Suarez, Txema Heredia, Angel Carreño-Torres

Int J Data Min Bioinform· January 2013

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Four new loci associations discovered by pathway-based and network analyses of the genome-wide variability profile of Hirschsprung's disease.
Raquel Ma Fernández, Marta Bleda, Rocío Núñez-Torres, Ignacio Medina, Berta Luzón-Toro

Orphanet J Rare Dis· December 2012

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Discovering the hidden sub-network component in a ranked list of genes or proteins derived from genomic experiments.
Luz García-Alonso, Roberto Alonso, Enrique Vidal, Alicia Amadoz, Alejandro de María, Ignacio Medina

Nucleic Acids Res· November 2012

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CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources.
Marta Bleda, Joaquin Tarraga, Alejandro de Maria, Francisco Salavert, Luz Garcia-Alonso, Ignacio Medina

Nucleic Acids Res· July 2012

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