Publications by authors named "Ingemar Andre"

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E
Effects of solution conditions on the self-assembly of the chaperone protein DNAJB6b.
Andreas Carlsson, Victoria Maier, Celia Fricke, Tinna Pálmadóttir, Ingemar André

Commun Chem· October 2025

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Accurate prediction of substitution rates at protein sites with a mutation-selection model.
Ingemar André

Sci Rep· October 2025

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Improved prediction of site-rates from structure with averaging across homologs.
Christoffer Norn, Fábio Oliveira, Ingemar André

Protein Sci· July 2024

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Accurate prediction of protein assembly structure by combining AlphaFold and symmetrical docking.
Mads Jeppesen, Ingemar André

Nat Commun· December 2023

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Facile Method for High-throughput Identification of Stabilizing Mutations.
Signe Christensen, Camille Wernersson, Ingemar André

J Mol Biol· September 2023

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Atomistic simulation of protein evolution reveals sequence covariation and time-dependent fluctuations of site-specific substitution rates.
Christoffer Norn, Ingemar André

PLoS Comput Biol· March 2023

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A memetic algorithm enables efficient local and global all-atom protein-protein docking with backbone and side-chain flexibility.
Daniel Varela, Vera Karlin, Ingemar André

Structure· November 2022

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DnaK response to expression of protein mutants is dependent on translation rate and stability.
Signe Christensen, Sebastian Rämisch, Ingemar André

Commun Biol· June 2022

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Amyloid β 42 fibril structure based on small-angle scattering.
Veronica Lattanzi, Ingemar André, Urs Gasser, Marija Dubackic, Ulf Olsson

Proc Natl Acad Sci U S A· November 2021

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A thermodynamic model of protein structure evolution explains empirical amino acid substitution matrices.
Christoffer Norn, Ingemar André, Douglas L Theobald

Protein Sci· October 2021

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ZEAL: protein structure alignment based on shape similarity.
Filip Ljung, Ingemar André

Bioinformatics· September 2021

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An ultra-high affinity protein-protein interface displaying sequence-robustness.
Marie Sofie Møller, Sita Vaag Olesen, Ingemar André

Protein Sci· June 2021

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Orientational Ambiguity in Septin Coiled Coils and its Structural Basis.
Diego A Leonardo, Italo A Cavini, Fernanda A Sala, Deborah C Mendonça, Higor V D Rosa

J Mol Biol· April 2021

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Crystal Structure of Non-Structural Protein 10 from Severe Acute Respiratory Syndrome Coronavirus-2.
Annika Rogstam, Maria Nyblom, Signe Christensen, Celeste Sele, Vladimir O Talibov

Int J Mol Sci· October 2020

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Assembly of Capsids from Hepatitis B Virus Core Protein Progresses through Highly Populated Intermediates in the Presence and Absence of RNA.
Ryan C Oliver, Wojciech Potrzebowski, Seyed Morteza Najibi, Martin Nors Pedersen, Lise Arleth

ACS Nano· August 2020

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Wnt5a is a TLR2/4-ligand that induces tolerance in human myeloid cells.
Meliha Mehmeti, Caroline Bergenfelz, Eva Källberg, Camilla Rydberg Millrud, Per Björk

Commun Biol· April 2020

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Modeling the Structure of Helical Assemblies with Experimental Constraints in Rosetta.
Ingemar André

Methods Mol Biol· February 2019

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Bayesian inference of protein conformational ensembles from limited structural data.
Wojciech Potrzebowski, Jill Trewhella, Ingemar Andre

PLoS Comput Biol· December 2018

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A Protein-Based Encapsulation System with Calcium-Controlled Cargo Loading and Detachment.
Robert Lizatović, Marvin Assent, Arjan Barendregt, Jonathan Dahlin, Anna Bille

Angew Chem Int Ed Engl· August 2018

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C
Computational assessment of folding energy landscapes in heterodimeric coiled coils.
Ingemar André, Sinisa Bjelic

Proteins· July 2018

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Thermal stability and structural changes in bacterial toxins responsible for food poisoning.
Paulina Regenthal, Jesper S Hansen, Ingemar André, Karin Lindkvist-Petersson

PLoS One· September 2017

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Correction: Thermal stability and structural changes in bacterial toxins responsible for food poisoning.
Paulina Regenthal, Jesper S Hansen, Ingemar André, Karin Lindkvist-Petersson

PLoS One· April 2017

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C
Computational design of protein self-assembly.
Christoffer H Norn, Ingemar André

Curr Opin Struct Biol· August 2016

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A De Novo Designed Coiled-Coil Peptide with a Reversible pH-Induced Oligomerization Switch.
Robert Lizatović, Oskar Aurelius, Olof Stenström, Torbjörn Drakenberg, Mikael Akke

Structure· June 2016

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Mapping the Ca(2+) induced structural change in calreticulin.
Sanne Grundvad Boelt, Christoffer Norn, Morten Ib Rasmussen, Ingemar André, Evaldas Čiplys

J Proteomics· June 2016

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