Publications by authors named "Ivory Blakley"

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Wastewater Speaks: Evaluating SARS-CoV-2 Surveillance, Sampling Methods, and Seasonal Infection Trends on a University Campus.
Shilpi Bhatia, Tinyiko Nicole Maswanganye, Olusola Jeje, Danielle Winston, Mehdi Lamssali, Ivory Blakley

Microorganisms· April 2025

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Microbial Associations With Microscopic Colitis.
Shan Sun, Ivory C Blakley, Anthony A Fodor, Temitope O Keku, John T Woosley

Clin Transl Gastroenterol· October 2022

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Race, the Vaginal Microbiome, and Spontaneous Preterm Birth.
Shan Sun, Myrna G Serrano, Jennifer M Fettweis, Patricia Basta, Emma Rosen, Ivory C Blakley

mSystems· June 2022

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On the robustness of inference of association with the gut microbiota in stool, rectal swab and mucosal tissue samples.
Shan Sun, Xiangzhu Zhu, Xiang Huang, Harvey J Murff, Reid M Ness, Ivory C Blakley

Sci Rep· July 2021

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The Arabidopsis transcription factor AINTEGUMENTA orchestrates patterning genes and auxin signaling in the establishment of floral growth and form.
Beth A Krizek, Ivory C Blakley, Yen-Yi Ho, Nowlan Freese, Ann E Loraine

Plant J· July 2020

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Air pollution exposure is associated with the gut microbiome as revealed by shotgun metagenomic sequencing.
Farnaz Fouladi, Maximilian J Bailey, William B Patterson, Michael Sioda, Ivory C Blakley

Environ Int· May 2020

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Many rice genes are differentially spliced between roots and shoots but cytokinin has minimal effect on splicing.
Nowlan H Freese, April R Estrada, Ivory C Blakley, Jinjie Duan, Ann E Loraine

Plant Direct· May 2019

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Coordination of Chloroplast Development through the Action of the GNC and GLK Transcription Factor Families.
Yan O Zubo, Ivory Clabaugh Blakley, José M Franco-Zorrilla, Maria V Yamburenko, Roberto Solano

Plant Physiol· September 2018

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Cytokinin induces genome-wide binding of the type-B response regulator ARR10 to regulate growth and development in .
Yan O Zubo, Ivory Clabaugh Blakley, Maria V Yamburenko, Jennifer M Worthen, Ian H Street

Proc Natl Acad Sci U S A· July 2017

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RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing.
Vikas Gupta, April D Estrada, Ivory Blakley, Rob Reid, Ketan Patel

Gigascience· December 2016

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Characterization of the cytokinin-responsive transcriptome in rice.
Tracy Raines, Ivory C Blakley, Yu-Chang Tsai, Jennifer M Worthen, José Manuel Franco-Zorrilla

BMC Plant Biol· December 2016

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RNA-Seq Links the Transcription Factors AINTEGUMENTA and AINTEGUMENTA-LIKE6 to Cell Wall Remodeling and Plant Defense Pathways.
Beth A Krizek, Carlton J Bequette, Kaimei Xu, Ivory C Blakley, Zheng Qing Fu

Plant Physiol· July 2016

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Analysis and visualization of RNA-Seq expression data using RStudio, Bioconductor, and Integrated Genome Browser.
Ann E Loraine, Ivory Clabaugh Blakley, Sridharan Jagadeesan, Jeff Harper, Gad Miller

Methods Mol Biol· November 2015

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A Comparison of transgenic and wild type soybean seeds: analysis of transcriptome profiles using RNA-Seq.
Kevin C Lambirth, Adam M Whaley, Ivory C Blakley, Jessica A Schlueter, Kenneth L Bost

BMC Biotechnol· October 2015

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Analysis of pollen-specific alternative splicing in Arabidopsis thaliana via semi-quantitative PCR.
April D Estrada, Nowlan H Freese, Ivory C Blakley, Ann E Loraine

PeerJ· May 2015

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