Publications by authors named "Jack Morikka"

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BMDx2: A Tool for Integrating Toxicogenomics-Based Dose-Dependency Analysis and AOP-Based Mechanistic Insights.
Angela Serra, Michele Fratello, Giorgia Migliaccio, Emanuele Di Lieto, Marcella Torres Maia, Jack Morikka

Small Methods· December 2025

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CHIASMA: Advancing chemicals and materials safety and sustainability assessments through innovative integration of in vitro and in silico (new approach) methodologies.
Pamina Weber, Emma Arnesdotter, Nour Attar, Steffi Friedrichs, Christian Seitz, Jack Morikka

Comput Struct Biotechnol J· December 2025

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OpTiles: an R package for adaptive tiling and methylation variability profiling.
Giorgia Migliaccio, Lena Möbus, Giusy Del Giudice, Jack Morikka, Antonio Federico

Bioinformatics· November 2025

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INSIGHT: An integrated framework for safe and sustainable chemical and material assessment.
Angela Serra, Dimitrios Zouraris, Alexandra Schaffert, Marcella Torres Maia, Periklis Tsiros, Jack Morikka

Comput Struct Biotechnol J· March 2025

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Methylation and transcriptomic profiling reveals short term and long term regulatory responses in polarized macrophages.
Giorgia Migliaccio, Jack Morikka, Giusy Del Giudice, Maaret Vaani, Lena Möbus

Comput Struct Biotechnol J· December 2024

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Toxicogenomic assessment of in vitro macrophages exposed to profibrotic challenge reveals a sustained transcriptomic immune signature.
Jack Morikka, Antonio Federico, Lena Möbus, Simo Inkala, Alisa Pavel

Comput Struct Biotechnol J· December 2024

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The in vitro immunomodulatory effect of multi-walled carbon nanotubes by multilayer analysis.
Veera Hautanen, Jack Morikka, Laura Aliisa Saarimäki, Jan Bisenberger, Tarja Toimela

NanoImpact· July 2023

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Toxicogenomics Data for Chemical Safety Assessment and Development of New Approach Methodologies: An Adverse Outcome Pathway-Based Approach.
Laura Aliisa Saarimäki, Jack Morikka, Alisa Pavel, Seela Korpilähde, Giusy Del Giudice

Adv Sci (Weinh)· January 2023

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Metabolic gene regulation by Drosophila GATA transcription factor Grain.
Krista Kokki, Nicole Lamichane, Anni I Nieminen, Hanna Ruhanen, Jack Morikka

PLoS Genet· October 2021

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An image analysis method for regionally defined cellular phenotyping of the midgut.
Arto Viitanen, Josef Gullmets, Jack Morikka, Pekka Katajisto, Jaakko Mattila

Cell Rep Methods· September 2021

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