Publications by authors named "Jack Windig"

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Genomics Reveals Distinct Evolutionary Lineages in Asian Elephants.
Jeroen Kappelhof, Emma Diepeveen, Martijn F L Derks, Ole Madsen, Rebekah Rogers, Jack J Windig

Ecol Evol· August 2025

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Breed-environment interaction of native Dutch cattle breeds in agroecological context.
Gerbrich Bonekamp, Mira A Schoon, Sipke-Joost Hiemstra, Rita A H Hoving-Bolink, Jan Ten Napel, Jack J Windig

J Dairy Sci· June 2025

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Unique genetic signature and selection footprints in Dutch population of German Longhaired Pointer dogs.
Yun Yu, Langqing Liu, Jack Windig, Mirte Bosse, Martien A M Groenen

Anim Genet· December 2022

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Opportunities of Genomics for the Use of Semen Cryo-Conserved in Gene Banks.
J Kor Oldenbroek, Jack J Windig

Front Genet· July 2022

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Selection and Drift: A Comparison between Historic and Recent Dutch Friesian Cattle and Recent Holstein Friesian Using WGS Data.
Ina Hulsegge, Kor Oldenbroek, Aniek Bouwman, Roel Veerkamp, Jack Windig

Animals (Basel)· January 2022

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How Depressing Is Inbreeding? A Meta-Analysis of 30 Years of Research on the Effects of Inbreeding in Livestock.
Harmen P Doekes, Piter Bijma, Jack J Windig

Genes (Basel)· June 2021

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Retriever and Pointer: Software to Evaluate Inbreeding and Genetic Management in Captive Populations.
Jack J Windig, Ina Hulsegge

Animals (Basel)· May 2021

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Inbreeding depression across the genome of Dutch Holstein Friesian dairy cattle.
Harmen P Doekes, Piter Bijma, Roel F Veerkamp, Gerben de Jong, Yvonne C J Wientjes, Jack J Windig

Genet Sel Evol· October 2020

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Inbreeding depression due to recent and ancient inbreeding in Dutch Holstein-Friesian dairy cattle.
Harmen P Doekes, Roel F Veerkamp, Piter Bijma, Gerben de Jong, Sipke J Hiemstra, Jack J Windig

Genet Sel Evol· September 2019

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Reducing inbreeding rates with a breeding circle: Theory and practice in Veluws Heideschaap.
Jack J Windig, Marjolein J W Verweij, J Kor Oldenbroek

J Anim Breed Genet· January 2019

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Modelling of strategies for genetic control of scrapie in sheep: The importance of population structure.
Thomas J Hagenaars, Marielle B Melchior, Jack J Windig, Alex Bossers, Aart Davidse

PLoS One· July 2018

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The impact of using old germplasm on genetic merit and diversity-A cattle breed case study.
Sonia E Eynard, Jack J Windig, Ina Hulsegge, Sipke-Joost Hiemstra, Mario P L Calus

J Anim Breed Genet· May 2018

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Trends in genome-wide and region-specific genetic diversity in the Dutch-Flemish Holstein-Friesian breeding program from 1986 to 2015.
Harmen P Doekes, Roel F Veerkamp, Piter Bijma, Sipke J Hiemstra, Jack J Windig

Genet Sel Evol· April 2018

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Genomics of a revived breed: Case study of the Belgian campine cattle.
Liesbeth François, Katrien Wijnrocx, Frédéric G Colinet, Nicolas Gengler, Bettine Hulsegge, Jack J Windig

PLoS One· September 2017

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Genetic resistance to transmissible spongiform encephalopathies (TSE) in goats.

EFSA J· August 2017

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Prediction of the reliability of genomic breeding values for crossbred performance.
Jérémie Vandenplas, Jack J Windig, Mario P L Calus

Genet Sel Evol· May 2017

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Assigning breed origin to alleles in crossbred animals.
Jérémie Vandenplas, Mario P L Calus, Claudia A Sevillano, Jack J Windig, John W M Bastiaansen

Genet Sel Evol· August 2016

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Investigation of a Simple Model for Within-Flock Transmission of Scrapie.
Thomas J Hagenaars, Jack J Windig

PLoS One· June 2016

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Whole-genome sequence data uncover loss of genetic diversity due to selection.
Sonia E Eynard, Jack J Windig, Sipke J Hiemstra, Mario P L Calus

Genet Sel Evol· April 2016

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The effect of rare alleles on estimated genomic relationships from whole genome sequence data.
Sonia E Eynard, Jack J Windig, Grégoire Leroy, Rianne van Binsbergen, Mario P L Calus

BMC Genet· March 2015

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Genomic prediction based on data from three layer lines using non-linear regression models.
Heyun Huang, Jack J Windig, Addie Vereijken, Mario P L Calus

Genet Sel Evol· November 2014

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Genomic prediction based on data from three layer lines: a comparison between linear methods.
Mario Pl Calus, Heyun Huang, Addie Vereijken, Jeroen Visscher, Jan Ten Napel, Jack J Windig

Genet Sel Evol· October 2014

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Integration of epidemiology into the genetic analysis of mastitis in Swedish Holstein.
Jack J Windig, Jorge I Urioste, Erling Strandberg

J Dairy Sci· April 2013

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Eradication of scrapie with selective breeding: are we nearly there?
Marielle B Melchior, Jack J Windig, Thomas J Hagenaars, Alex Bossers, Aart Davidse

BMC Vet Res· May 2010

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Estimating genetic diversity across the neutral genome with the use of dense marker maps.
Krista A Engelsma, Mario P L Calus, Piter Bijma, Jack J Windig

Genet Sel Evol· May 2010

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