Publications by authors named "Jacob-B Landis"

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Differential expression of flavonoid biosynthetic pathway genes drives the production of transgressive pigments in Nicotiana section Repandae allotetraploids.
Elizabeth W McCarthy, Abigail G McCoy, Trinity M Tobin, Talieh Ostovar, Amy Litt, Jacob B Landis

Am J Bot· December 2025

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The complete genome sequences of 31 species of Costaceae (Zingiberales).
Jacob B Landis, Stacy Pirro, Chelsea D Specht

Biodivers Genomes· November 2025

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Spatial distribution patterns and formation of global spermatophytes.
Xian-Han Huang, Tao Deng, Jun-Tong Chen, Quan-Sheng Fu, Xin-Jian Zhang, Jacob-B Landis

J Integr Plant Biol· October 2025

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Genome sequencing and population genomics provide insights into the demographic history, genetic load, and local adaptation of an endangered Tertiary relict.
Nan Lin, Yakun Wang, Jacob B Landis, Xiankun Wang, Yuxuan He

Plant J· August 2025

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Reference genome of Calochortus tolmiei Hook. & Arn. (Liliaceae), a cat's ear mariposa lily.
Jacob B Landis, Julianna J Harden, Evan Eifler, Gretta L Buttelman, Adriana I Hernández

G3 (Bethesda)· March 2025

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Differential Gene Expression and Unbalanced Homeolog Expression Bias in 4 Million-Year-Old Allopolyploids of Nicotiana Section Repandae.
Talieh Ostovar, Jacob B Landis, Elizabeth W McCarthy, Nicolas Sierro, Amy Litt

Genome Biol Evol· March 2025

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Nuclear phylogenomics of Eperua (Leguminosae) highlights the role of habitat and morphological lability in dispersal and diversification across Amazonia and in the Caatinga-Cerrado ecotone.
Elenice A Fortes, Jacob B Landis, Hans Ter Steege, Chelsea D Specht, Jeff J Doyle

Mol Phylogenet Evol· January 2025

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Shifts in reproductive strategies in the evolutionary trajectory of plant lineages.
Xin-Jian Zhang, Xian-Han Huang, Jacob B Landis, Quan-Sheng Fu, Jun-Tong Chen

Sci China Life Sci· November 2024

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Data-driven guidelines for phylogenomic analyses using SNP data.
Jacob S Suissa, Gisel Y De La Cerda, Leland C Graber, Chloe Jelley, David Wickell, Jacob B Landis

Appl Plant Sci· August 2024

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Natural selection drives emergent genetic homogeneity in a century-scale experiment with barley.
Jacob B Landis, Angelica M Guercio, Keely E Brown, Christopher J Fiscus, Peter L Morrell

Science· July 2024

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nQuack: An R package for predicting ploidal level from sequence data using site-based heterozygosity.
Michelle L Gaynor, Jacob B Landis, Timothy K O'Connor, Robert G Laport, Jeff J Doyle

Appl Plant Sci· July 2024

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Pleistocene glaciation advances the cryptic speciation of Stellera chamaejasme L. in a major biodiversity hotspot.
Santosh Kumar Rana, Hum Kala Rana, Jacob B Landis, Tianhui Kuang, Juntong Chen

J Integr Plant Biol· June 2024

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Chromosomal evolution, environmental heterogeneity, and migration drive spatial patterns of species richness in (Liliaceae).
Nisa Karimi, Christopher P Krieg, Daniel Spalink, Alan R Lemmon, Emily Moriarty Lemmon, Jacob B Landis

Proc Natl Acad Sci U S A· March 2024

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Genome assembly of the snow lotus species provides insights into acacetin and rutin biosynthesis and tolerance to an alpine environment.
Yanxia Sun, Aidi Zhang, Jacob B Landis, Wei Shi, Xiujun Zhang

Hortic Res· October 2023

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An updated classification for the hyper-diverse genus Corydalis (Papaveraceae: Fumarioideae) based on phylogenomic and morphological evidence.
Jun-Tong Chen, Magnus Lidén, Xian-Han Huang, Liang Zhang, Xin-Jian Zhang, Jacob B Landis

J Integr Plant Biol· September 2023

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Genomic convergence underlying high-altitude adaptation in alpine plants.
Xu Zhang, Tianhui Kuang, Wenlin Dong, Zhihao Qian, Huajie Zhang, Jacob B Landis

J Integr Plant Biol· July 2023

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Target sequence capture data shed light on the deeper evolutionary relationships of subgenus Chamaecerasus in Lonicera (Caprifoliaceae).
Qing-Hui Sun, Diego F Morales-Briones, Hong-Xin Wang, Jacob B Landis, Jun Wen

Mol Phylogenet Evol· July 2023

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Balancing read length and sequencing depth: Optimizing Nanopore long-read sequencing for monocots with an emphasis on the Liliales.
Gisel Y De La Cerda, Jacob B Landis, Evan Eifler, Adriana I Hernandez, Fay-Wei Li

Appl Plant Sci· June 2023

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The genomic and epigenetic footprint of local adaptation to variable climates in kiwifruit.
Xu Zhang, Rui Guo, Ruinan Shen, Jacob B Landis, Quan Jiang

Hortic Res· April 2023

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Phylogeny and evolution of Asparagaceae subfamily Nolinoideae: new insights from plastid phylogenomics.
Yunheng Ji, Jacob B Landis, Jin Yang, Shuying Wang, Nian Zhou

Ann Bot· March 2023

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Towards a global perspective for Salvia L.: Phylogeny, diversification and floral evolution.
Fatemeh Moein, Ziba Jamzad, Mohammadreza Rahiminejad, Jacob B Landis, Mansour Mirtadzadini

J Evol Biol· March 2023

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Insights into the differentiation and adaptation within Circaeasteraceae from genome sequencing and resequencing.
Yanxia Sun, Aidi Zhang, Xu Zhang, Jacob B Landis, Huajie Zhang

iScience· March 2023

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Population Genomic Analyses Suggest a Hybrid Origin, Cryptic Sexuality, and Decay of Genes Regulating Seed Development for the Putatively Strictly Asexual (Circaeasteraceae, Ranunculales).
Yanxia Sun, Xu Zhang, Aidi Zhang, Jacob B Landis, Huajie Zhang

Int J Mol Sci· January 2023

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Plastome phylogenomics and biogeography of the subfam. Polygonoideae (Polygonaceae).
Huajie Zhang, Xu Zhang, Yanxia Sun, Jacob B Landis, Lijuan Li

Front Plant Sci· October 2022

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Plastome structure, phylogenomic analyses and molecular dating of Arecaceae.
Da-Juan Chen, Jacob B Landis, Hong-Xin Wang, Qing-Hui Sun, Qiao Wang

Front Plant Sci· September 2022

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