Publications by authors named "James A Cahill"

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Equitable machine learning counteracts ancestral bias in precision medicine.
Leslie A Smith, James A Cahill, Ji-Hyun Lee, Kiley Graim

Nat Commun· March 2025

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Bringing the Genomic Revolution to Comparative Oncology: Human and Dog Cancers.
James A Cahill, Leslie A Smith, Soumya Gottipati, Tina Salehi Torabi, Kiley Graim

Annu Rev Biomed Data Sci· August 2024

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Equitable machine learning counteracts ancestral bias in precision medicine, improving outcomes for all.
Leslie A Smith, James A Cahill, Kiley Graim

Res Sq· July 2023

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Positive selection in noncoding genomic regions of vocal learning birds is associated with genes implicated in vocal learning and speech functions in humans.
James A Cahill, Joel Armstrong, Alden Deran, Carolyn J Khoury, Benedict Paten

Genome Res· November 2021

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Environmental genomics of Late Pleistocene black bears and giant short-faced bears.
Mikkel Winther Pedersen, Bianca De Sanctis, Nedda F Saremi, Martin Sikora, Emily E Puckett, James A Cahill

Curr Biol· June 2021

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African and Asian leopards are highly differentiated at the genomic level.
Johanna L A Paijmans, Axel Barlow, Matthew S Becker, James A Cahill, Joerns Fickel

Curr Biol· May 2021

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Universal nomenclature for oxytocin-vasotocin ligand and receptor families.
Constantina Theofanopoulou, Gregory Gedman, James A Cahill, Cedric Boeckx, Erich D Jarvis

Nature· April 2021

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Modeling molecular development of breast cancer in canine mammary tumors.
Kiley Graim, Dmitriy Gorenshteyn, David G Robinson, Nicholas J Carriero, James A Cahill

Genome Res· February 2021

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Author Correction: Puma genomes from North and South America provide insights into the genomic consequences of inbreeding.
Nedda F Saremi, Megan A Supple, Ashley Byrne, James A Cahill, Luiz Lehmann Coutinho

Nat Commun· November 2019

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Puma genomes from North and South America provide insights into the genomic consequences of inbreeding.
Nedda F Saremi, Megan A Supple, Ashley Byrne, James A Cahill, Luiz Lehmann Coutinho

Nat Commun· October 2019

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Hybridization in human evolution: Insights from other organisms.
Rebecca R Ackermann, Michael L Arnold, Marcella D Baiz, James A Cahill, Liliana Cortés-Ortiz

Evol Anthropol· July 2019

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Partial genomic survival of cave bears in living brown bears.
Axel Barlow, James A Cahill, Stefanie Hartmann, Christoph Theunert, Georgios Xenikoudakis

Nat Ecol Evol· October 2018

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Genomic Evidence of Widespread Admixture from Polar Bears into Brown Bears during the Last Ice Age.
James A Cahill, Peter D Heintzman, Kelley Harris, Matthew D Teasdale, Joshua Kapp

Mol Biol Evol· May 2018

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Survival and divergence in a small group: The extraordinary genomic history of the endangered Apennine brown bear stragglers.
Andrea Benazzo, Emiliano Trucchi, James A Cahill, Pierpaolo Maisano Delser, Stefano Mona

Proc Natl Acad Sci U S A· November 2017

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Natural selection shaped the rise and fall of passenger pigeon genomic diversity.
Gemma G R Murray, André E R Soares, Ben J Novak, Nathan K Schaefer, James A Cahill

Science· November 2017

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A new genus of horse from Pleistocene North America.
Peter D Heintzman, Grant D Zazula, Ross DE MacPhee, Eric Scott, James A Cahill

Elife· November 2017

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Response to Hohenlohe .
Bridgett M vonHoldt, James A Cahill, Ilan Gronau, Beth Shapiro, Jeff Wall

Sci Adv· June 2017

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Complex Admixture Preceded and Followed the Extinction of Wisent in the Wild.
Karolina Wecek, Stefanie Hartmann, Johanna L A Paijmans, Ulrike Taron, Georgios Xenikoudakis, James A Cahill

Mol Biol Evol· March 2017

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Inferring species divergence times using pairwise sequential Markovian coalescent modelling and low-coverage genomic data.
James A Cahill, André E R Soares, Richard E Green, Beth Shapiro

Philos Trans R Soc Lond B Biol Sci· July 2016

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Whole-genome sequence analysis shows that two endemic species of North American wolf are admixtures of the coyote and gray wolf.
Bridgett M vonHoldt, James A Cahill, Zhenxin Fan, Ilan Gronau, Jacqueline Robinson

Sci Adv· July 2016

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Genomic Data from Extinct North American Camelops Revise Camel Evolutionary History.
Peter D Heintzman, Grant D Zazula, James A Cahill, Alberto V Reyes, Ross D E MacPhee

Mol Biol Evol· September 2015

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Genome-wide Evidence Reveals that African and Eurasian Golden Jackals Are Distinct Species.
Klaus-Peter Koepfli, John Pollinger, Raquel Godinho, Jacqueline Robinson, Amanda Lea, James A Cahill

Curr Biol· August 2015

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Genomic evidence of geographically widespread effect of gene flow from polar bears into brown bears.
James A Cahill, Ian Stirling, Logan Kistler, Rauf Salamzade, Erik Ersmark

Mol Ecol· March 2015

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Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution.
James A Cahill, Richard E Green, Tara L Fulton, Mathias Stiller, Flora Jay

PLoS Genet· June 2013

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Specification, annotation, visualization and simulation of a large rule-based model for ERBB receptor signaling.
Matthew S Creamer, Edward C Stites, Meraj Aziz, James A Cahill, Chin Wee Tan

BMC Syst Biol· August 2012

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