Publications by authors named "James Battey"

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Correction: Nicotine-mediated effects in neuronal and mouse models of synucleinopathy.
Mohamed Bilal Fares, Omar Alijevic, Stephanie Johne, Cassia Overk, Makoto Hashimoto, James Battey

Front Neurosci· September 2025

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Nicotine-mediated effects in neuronal and mouse models of synucleinopathy.
Mohamed Bilal Fares, Omar Alijevic, Stephanie Johne, Cassia Overk, Makoto Hashimoto, James Battey

Front Neurosci· August 2023

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Dissection of Cancer Mutational Signatures with Individual Components of Cigarette Smoking.
Cécile Mingard, James N D Battey, Vakil Takhaveev, Katharina Blatter, Vera Hürlimann

Chem Res Toxicol· April 2023

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Results and lessons learned from the sbv IMPROVER metagenomics diagnostics for inflammatory bowel disease challenge.
Lusine Khachatryan, Yang Xiang, Artem Ivanov, Enrico Glaab, Garrett Graham, James Battey

Sci Rep· April 2023

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Crowdsourced benchmarking of taxonomic metagenome profilers: lessons learned from the sbv IMPROVER Microbiomics challenge.
Carine Poussin, Lusine Khachatryan, Nicolas Sierro, Vijay Kumar Narsapuram, Fernando Meyer, James N D Battey

BMC Genomics· August 2022

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A Literature Review and Framework Proposal for Halitosis Assessment in Cigarette Smokers and Alternative Nicotine-Delivery Products Users.
Filippo Zanetti, Tanja Zivkovic Semren, James N D Battey, Philippe A Guy, Nikolai V Ivanov

Front Oral Health· December 2021

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Impact of 6-Month Exposure to Aerosols From Potential Modified Risk Tobacco Products Relative to Cigarette Smoke on the Rodent Gastrointestinal Tract.
James N D Battey, Justyna Szostak, Blaine Phillips, Charles Teng, Ching Keong Tung

Front Microbiol· July 2021

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Metabolic networks of the Nicotiana genus in the spotlight: content, progress and outlook.
Hartmut Foerster, James N D Battey, Nicolas Sierro, Nikolai V Ivanov, Lukas A Mueller

Brief Bioinform· May 2021

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Discriminating Spontaneous From Cigarette Smoke and THS 2.2 Aerosol Exposure-Related Proliferative Lung Lesions in A/J Mice by Using Gene Expression and Mutation Spectrum Data.
Yang Xiang, Karsta Luettich, Florian Martin, James N D Battey, Keyur Trivedi

Front Toxicol· March 2021

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Inflammatory Bowel Disease-Associated Changes in the Gut: Focus on Kazan Patients.
Giuseppe Lo Sasso, Lusine Khachatryan, Athanasios Kondylis, James N D Battey, Nicolas Sierro

Inflamm Bowel Dis· February 2021

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The reduction of DSS-induced colitis severity in mice exposed to cigarette smoke is linked to immune modulation and microbial shifts.
Giuseppe Lo Sasso, Blaine W Phillips, Alain Sewer, James N D Battey, Athanasios Kondylis

Sci Rep· March 2020

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Asparagine Synthesis During Tobacco Leaf Curing.
Lucien Bovet, Cecilia Cheval, Aurore Hilfiker, James Battey, Delphine Langlet

Plants (Basel)· November 2019

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Interrogating the microbiome: experimental and computational considerations in support of study reproducibility.
Carine Poussin, Nicolas Sierro, Stéphanie Boué, James Battey, Elena Scotti

Drug Discov Today· September 2018

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SolCyc: a database hub at the Sol Genomics Network (SGN) for the manual curation of metabolic networks in Solanum and Nicotiana specific databases.
Hartmut Foerster, Aureliano Bombarely, James N D Battey, Nicolas Sierro, Nikolai V Ivanov

Database (Oxford)· January 2018

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Impairing both HMA4 homeologs is required for cadmium reduction in tobacco.
Verena Liedschulte, Hélène Laparra, James Nicolas Duncan Battey, Joanne Deborah Schwaar, Hervé Broye

Plant Cell Environ· March 2017

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Basic science: Bedrock of progress.
Francis S Collins, James M Anderson, Christopher P Austin, James F Battey, Linda S Birnbaum

Science· March 2016

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The tobacco genome sequence and its comparison with those of tomato and potato.
Nicolas Sierro, James N D Battey, Sonia Ouadi, Nicolas Bakaher, Lucien Bovet

Nat Commun· May 2014

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Chronic itch development in sensory neurons requires BRAF signaling pathways.
Zhong-Qiu Zhao, Fu-Quan Huo, Joseph Jeffry, Lori Hampton, Shadmehr Demehri, James F Battey

J Clin Invest· November 2013

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Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana tomentosiformis.
Nicolas Sierro, James N D Battey, Sonia Ouadi, Lucien Bovet, Simon Goepfert

Genome Biol· June 2013

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The mammalian gene function resource: the International Knockout Mouse Consortium.
Allan Bradley, Konstantinos Anastassiadis, Abdelkader Ayadi, James F Battey, Cindy Bell

Mamm Genome· October 2012

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The Protein Model Portal.
Konstantin Arnold, Florian Kiefer, Jürgen Kopp, James N D Battey, Michael Podvinec

J Struct Funct Genomics· March 2009

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Protein structure homology modeling using SWISS-MODEL workspace.
Lorenza Bordoli, Florian Kiefer, Konstantin Arnold, Pascal Benkert, James Battey

Nat Protoc· March 2009

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Double homozygous waltzer and Ames waltzer mice provide no evidence of retinal degeneration.
Zubair M Ahmed, Sten Kjellstrom, Ricky J L Haywood-Watson, Ronald A Bush, Lori L Hampton, James F Battey

Mol Vis· January 2009

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Factors contributing to obesity in bombesin receptor subtype-3-deficient mice.
Ellen E Ladenheim, Nahketah L Hamilton, Robert R Behles, Sheng Bi, Lori L Hampton, James F Battey

Endocrinology· March 2008

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Automated server predictions in CASP7.
James N D Battey, Jürgen Kopp, Lorenza Bordoli, Randy J Read, Neil D Clarke

Proteins· January 2008

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