Publications by authors named "James C Carrington"

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Allelic differences within DNA polymerase delta subunit 1 correlate with geminivirus resistance in diverse plants.
Kerrigan B Gilbert, Patricia Gallardo, Stefanie F King, Cheyenne M Morris, Gabriela L Hernandez, James C Carrington

G3 (Bethesda)· December 2025

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Improving cassava bacterial blight resistance by editing the epigenome.
Kira M Veley, Kiona Elliott, Greg Jensen, Zhenhui Zhong, Suhua Feng, James C Carrington

Nat Commun· January 2023

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Hiding in plain sight: New virus genomes discovered via a systematic analysis of fungal public transcriptomes.
Kerrigan B Gilbert, Emily E Holcomb, Robyn L Allscheid, James C Carrington

PLoS One· February 2020

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Sequence and Expression Differences Underlie Functional Specialization of Arabidopsis MicroRNAs miR159 and miR319.
Javier F Palatnik, Heike Wollmann, Carla Schommer, Rebecca Schwab, Jerôme Boisbouvier, James C Carrington

Dev Cell· October 2019

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Antiviral ARGONAUTEs Against Revealed by Image-Based Trait Analysis.
Xingguo Zheng, Noah Fahlgren, Arash Abbasi, Jeffrey C Berry, James C Carrington

Plant Physiol· July 2019

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Simultaneous CRISPR/Cas9-mediated editing of cassava eIF4E isoforms nCBP-1 and nCBP-2 reduces cassava brown streak disease symptom severity and incidence.
Michael A Gomez, Z Daniel Lin, Theodore Moll, Raj Deepika Chauhan, Luke Hayden, James C Carrington

Plant Biotechnol J· February 2019

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Functional dissection of the promoter.
J Steen Hoyer, Jose L Pruneda-Paz, Ghislain Breton, Mariah A Hassert, Emily E Holcomb, James C Carrington

Plant Direct· January 2019

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Raspberry Pi-powered imaging for plant phenotyping.
Jose C Tovar, J Steen Hoyer, Andy Lin, Allison Tielking, Steven T Callen, James C Carrington

Appl Plant Sci· March 2018

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Differential response of cassava genotypes to infection by cassava mosaic geminiviruses.
Paul Kuria, Muhammad Ilyas, Elijah Ateka, Douglas Miano, Justus Onguso, James C Carrington

Virus Res· January 2017

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Loss of CMD2-mediated resistance to cassava mosaic disease in plants regenerated through somatic embryogenesis.
Getu Beyene, Raj Deepika Chauhan, Henry Wagaba, Theodore Moll, Titus Alicai, James C Carrington

Mol Plant Pathol· September 2016

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Small RNA-Based Antiviral Defense in the Phytopathogenic Fungus Colletotrichum higginsianum.
Sonia Campo, Kerrigan B Gilbert, James C Carrington

PLoS Pathog· June 2016

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P-SAMS: a web site for plant artificial microRNA and synthetic trans-acting small interfering RNA design.
Noah Fahlgren, Steven T Hill, James C Carrington, Alberto Carbonell

Bioinformatics· January 2016

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Fast-forward generation of effective artificial small RNAs for enhanced antiviral defense in plants.
Alberto Carbonell, James C Carrington, José-Antonio Daròs

RNA Dis· January 2016

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CG gene body DNA methylation changes and evolution of duplicated genes in cassava.
Haifeng Wang, Getu Beyene, Jixian Zhai, Suhua Feng, Noah Fahlgren, James C Carrington

Proc Natl Acad Sci U S A· November 2015

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A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria.
Noah Fahlgren, Maximilian Feldman, Malia A Gehan, Melinda S Wilson, Christine Shyu, James C Carrington

Mol Plant· October 2015

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Antiviral roles of plant ARGONAUTES.
Alberto Carbonell, James C Carrington

Curr Opin Plant Biol· October 2015

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Highly specific gene silencing in a monocot species by artificial microRNAs derived from chimeric miRNA precursors.
Alberto Carbonell, Noah Fahlgren, Skyler Mitchell, Kevin L Cox, Kevin C Reilly, James C Carrington

Plant J· June 2015

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Roles and programming of Arabidopsis ARGONAUTE proteins during Turnip mosaic virus infection.
Hernan Garcia-Ruiz, Alberto Carbonell, J Steen Hoyer, Noah Fahlgren, Kerrigan B Gilbert, James C Carrington

PLoS Pathog· March 2015

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ARGONAUTE PIWI domain and microRNA duplex structure regulate small RNA sorting in Arabidopsis.
Xiaoming Zhang, DongDong Niu, Alberto Carbonell, Airong Wang, Angel Lee, James C Carrington

Nat Commun· November 2014

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Preparation of Multiplexed Small RNA Libraries From Plants.
Kerrigan B Gilbert, Noah Fahlgren, Kristin D Kasschau, Elisabeth J Chapman, James C Carrington

Bio Protoc· November 2014

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Specific argonautes selectively bind small RNAs derived from potato spindle tuber viroid and attenuate viroid accumulation in vivo.
Sofia Minoia, Alberto Carbonell, Francesco Di Serio, Andreas Gisel, James C Carrington

J Virol· October 2014

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Phytophthora have distinct endogenous small RNA populations that include short interfering and microRNAs.
Noah Fahlgren, Stephanie R Bollmann, Kristin D Kasschau, Josh T Cuperus, Caroline M Press, James C Carrington

PLoS One· August 2014

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New generation of artificial MicroRNA and synthetic trans-acting small interfering RNA vectors for efficient gene silencing in Arabidopsis.
Alberto Carbonell, Atsushi Takeda, Noah Fahlgren, Simon C Johnson, Josh T Cuperus, James C Carrington

Plant Physiol· May 2014

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Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon.
Dong-Hoon Jeong, Skye A Schmidt, Linda A Rymarquis, Sunhee Park, Matthias Ganssmann, James C Carrington

Genome Biol· December 2013

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Functional analysis of three Arabidopsis ARGONAUTES using slicer-defective mutants.
Alberto Carbonell, Noah Fahlgren, Hernan Garcia-Ruiz, Kerrigan B Gilbert, Taiowa A Montgomery, James C Carrington

Plant Cell· September 2012

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