Publications by authors named "James Haycocks"

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High-throughput chemical genomic screening: a step-by-step workflow from plate to phenotype.
Georgia Williams, Huda Ahmad, Susan Sutherland, James Haycocks, Sam Benedict

mSystems· December 2025

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Parallel regulatory circuits orchestrate biofilm formation in response to c-di-GMP levels and growth phase.
Michael A Trebino, Giordan Kitts, James R J Haycocks, Rachel Wheat, Issac Chaudry

PLoS Genet· September 2025

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Genome-wide mapping of cAMP receptor protein binding in enteroaggregative reveals targeting of virulence-associated genes.
Munirah M Alhammadi, Joanne Hothersall, Georgina S Lloyd, Sophie V Titman, Thomas Guest, James R J Haycocks

Microbiology (Reading)· August 2025

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Genome-wide mapping of cyclic AMP receptor protein binding in Enteroaggregative reveals targeting of virulence-associated genes.
Munirah M Alhammadi, Joanne Hothersall, Georgina S Lloyd, Sophie V Titman, Thomas Guest, James R J Haycocks

bioRxiv· August 2025

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H-NS is a bacterial transposon capture protein.
Charles Cooper, Simon Legood, Rachel L Wheat, David Forrest, Prateek Sharma, James R J Haycocks

Nat Commun· August 2024

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A simple mechanism for integration of quorum sensing and cAMP signalling in .
Lucas M Walker, James R J Haycocks, Julia C Van Kessel, Triana N Dalia, Ankur B Dalia

Elife· July 2023

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A simple mechanism for integration of quorum sensing and cAMP signalling in .
Lucas M Walker, James R J Haycocks, Julia C van Kessel, Triana N Dalia, Ankur B Dalia

bioRxiv· May 2023

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Mapping direct and indirect MarA/SoxS/Rob/RamA regulons in Typhimurium reveals repression of and biofilm formation.
Alistair D Middlemiss, James R J Haycocks, Anne M Stringer, Laura J V Piddock, Joseph T Wade

Microbiology (Reading)· May 2023

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An unexpected abundance of bidirectional promoters within Typhimurium plasmids.
Alistair D Middlemiss, Emily A Warman, David Forrest, James R J Haycocks, David C Grainger

Microbiology (Reading)· May 2023

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Homologs of the Escherichia coli F Element Protein TraR, Including Phage Lambda Orf73, Directly Reprogram Host Transcription.
Saumya Gopalkrishnan, Wilma Ross, Madeline S Akbari, Xintian Li, James R J Haycocks

mBio· June 2022

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Genome-wide mapping of Vibrio cholerae VpsT binding identifies a mechanism for c-di-GMP homeostasis.
Thomas Guest, James R J Haycocks, Gemma Z L Warren, David C Grainger

Nucleic Acids Res· January 2022

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A dual-function RNA balances carbon uptake and central metabolism in Vibrio cholerae.
Kavyaa Venkat, Mona Hoyos, James Rj Haycocks, Liam Cassidy, Beatrice Engelmann

EMBO J· December 2021

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Widespread divergent transcription from bacterial and archaeal promoters is a consequence of DNA-sequence symmetry.
Emily A Warman, David Forrest, Thomas Guest, James J R J Haycocks, Joseph T Wade

Nat Microbiol· June 2021

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The quorum sensing transcription factor AphA directly regulates natural competence in Vibrio cholerae.
James R J Haycocks, Gemma Z L Warren, Lucas M Walker, Jennifer L Chlebek, Triana N Dalia

PLoS Genet· October 2019

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Determination of the 3D Genome Organization of Bacteria Using Hi-C.
Frédéric G Crémazy, Fatema-Zahra M Rashid, James R Haycocks, Lisa E Lamberte, David C Grainger

Methods Mol Biol· April 2019

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Organization and architecture of AggR-dependent promoters from enteroaggregative Escherichia coli.
Muhammad Yasir, Christopher Icke, Radwa Abdelwahab, James R Haycocks, Rita E Godfrey

Mol Microbiol· February 2019

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cAMP Receptor Protein Controls Vibrio cholerae Gene Expression in Response to Host Colonization.
Jainaba Manneh-Roussel, James R J Haycocks, Andrés Magán, Nicolas Perez-Soto, Kerstin Voelz

mBio· July 2018

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The multiple antibiotic resistance operon of enteric bacteria controls DNA repair and outer membrane integrity.
Prateek Sharma, James R J Haycocks, Alistair D Middlemiss, Rachel A Kettles, Laura E Sellars

Nat Commun· November 2017

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Unusually Situated Binding Sites for Bacterial Transcription Factors Can Have Hidden Functionality.
James R J Haycocks, David C Grainger

PLoS One· August 2017

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The molecular basis for control of ETEC enterotoxin expression in response to environment and host.
James R J Haycocks, Prateek Sharma, Anne M Stringer, Joseph T Wade, David C Grainger

PLoS Pathog· January 2015

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