Publications by authors named "James Monaghan"

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Toward Human Lung Regeneration: Gaining Insights from the Axolotl Salamander .
Aaron C Dobie, Wathone Win, Darrell N Kotton, James R Monaghan

Am J Respir Cell Mol Biol· October 2025

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Retinoic acid breakdown is required for proximodistal positional identity during axolotl limb regeneration.
Timothy J Duerr, Melissa Miller, Sage Kumar, Dareen Bakr, Jackson R Griffiths, James R Monaghan

Nat Commun· June 2025

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A Characterization of Axolotl Digit Regeneration: Conserved Mechanisms, Divergent Patterning, and a Critical Role for Hedgehog Signaling.
Jackson R Griffiths, Melissa Miller, Timothy J Duerr, Ashlin E Owen, James R Monaghan

bioRxiv· June 2025

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3D spatial distribution of Sost mRNA and sclerostin protein expression in response to in vivo tibia loading in female mice.
Quentin A Meslier, Jacy Hoffmann, Robert Oehrlein, Daniel Kurczy, James R Monaghan

Bone· April 2025

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Rootrainertrons: a novel root phenotyping method used to identify genotypic variation in lettuce rooting.
Cara Wharton, Andrew Beacham, Miriam L Gifford, James Monaghan

Plant Methods· March 2025

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WISH-BONE: Whole-mount in situ histology, to label osteocyte mRNA and protein in 3D adult mouse bones.
Quentin A Meslier, Timothy J Duerr, Webster Guan, Brian Nguyen, James R Monaghan

FASEB J· October 2024

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Retinoic acid breakdown is required for proximodistal positional identity during amphibian limb regeneration.
Timothy J Duerr, Melissa Miller, Sage Kumar, Dareen Bakr, Jackson R Griffiths, James R Monaghan

bioRxiv· August 2024

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Recent progress and potential future directions to enhance biological nitrogen fixation in faba bean ( L.).
Tamanna Jithesh, Euan K James, Pietro P M Iannetta, Becky Howard, Edward Dickin, James M Monaghan

Plant Environ Interact· June 2024

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Material properties in regenerating axolotl limbs using inverse finite element analysis.
Vineel Kondiboyina, Timothy J Duerr, James R Monaghan, Sandra J Shefelbine

J Mech Behav Biomed Mater· February 2024

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Vacuolar Ca/H exchanger and Ca-ATPase homologues are differentially regulated in tipburn-resistant and susceptible lettuce (Lactuca sativa) cultivars.
Andrew M Beacham, Katie A Wilkins, Julia M Davies, James M Monaghan

Plant Physiol Biochem· August 2023

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Tipburn resilience in lettuce (Lactuca spp.) - the importance of germplasm resources and production system-specific assays.
Andrew M Beacham, Paul Hand, Graham R Teakle, Guy C Barker, David A C Pink, James M Monaghan

J Sci Food Agric· July 2023

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Usability of deep learning pipelines for 3D nuclei identification with Stardist and Cellpose.
Giona Kleinberg, Sophia Wang, Ester Comellas, James R Monaghan, Sandra J Shefelbine

Cells Dev· December 2022

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Click Chemistry-Enabled Conjugation Strategy for Producing Dibenzodiazepinone-Type Fluorescent Probes To Target M Acetylcholine Receptors.
Hongrong Yang, Nicholas Micovic, James R Monaghan, Heather A Clark

Bioconjug Chem· November 2022

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Establishing a New Research Axolotl Colony.
Anastasia S Yandulskaya, James R Monaghan

Methods Mol Biol· October 2022

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Hybridization Chain Reaction Fluorescence In Situ Hybridization (HCR-FISH) in Ambystoma mexicanum Tissue.
Alex M Lovely, Timothy J Duerr, David F Stein, Evan T Mun, James R Monaghan

Methods Mol Biol· October 2022

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Salamander models for elucidating mechanisms of developmental biology, evolution, and regeneration: Part two.
Catherine McCusker, Jessica Whited, James Monaghan

Dev Dyn· June 2022

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Local mechanical stimuli correlate with tissue growth in axolotl salamander joint morphogenesis.
Ester Comellas, Johanna E Farkas, Giona Kleinberg, Katlyn Lloyd, Thomas Mueller, James R Monaghan

Proc Biol Sci· May 2022

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Manipulation of the Phytochemical Profile of Tenderstem Broccoli Florets by Short Duration, Pre-Harvest LED Lighting.
Faye M A Langston, James M Monaghan, Olivia Cousins, Geoffrey R Nash, John R Bows

Molecules· May 2022

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Wnt Signaling Coordinates the Expression of Limb Patterning Genes During Axolotl Forelimb Development and Regeneration.
Alexander M Lovely, Timothy J Duerr, Qingchao Qiu, Santiago Galvan, S Randal Voss, James R Monaghan

Front Cell Dev Biol· April 2022

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A constitutively expressed fluorescent ubiquitination-based cell-cycle indicator (FUCCI) in axolotls for studying tissue regeneration.
Timothy J Duerr, Eun Kyung Jeon, Kaylee M Wells, Antonio Villanueva, Ashley W Seifert, James R Monaghan

Development· March 2022

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A matter of nerves.
Timothy J Duerr, James R Monaghan

Elife· December 2021

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HDAC Inhibitor Titration of Transcription and Axolotl Tail Regeneration.
S Randal Voss, Jeramiah J Smith, Raissa F Cecil, Mirindi Kabangu, Timothy J Duerr, James R Monaghan

Front Cell Dev Biol· December 2021

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Lung injury in axolotl salamanders induces an organ-wide proliferation response.
Tyler B Jensen, Peter Giunta, Natalie Grace Schultz, Jackson M Griffiths, Timothy J Duerr, James R Monaghan

Dev Dyn· June 2021

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Salamander models for elucidating mechanisms of developmental biology, evolution, and regeneration: Part one.
Catherine McCusker, James Monaghan, Jessica Whited

Dev Dyn· June 2021

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Imaging in vivo acetylcholine release in the peripheral nervous system with a fluorescent nanosensor.
Junfei Xia, Hongrong Yang, Michelle Mu, Nicholas Micovic, Kira E Poskanzer, James R Monaghan

Proc Natl Acad Sci U S A· April 2021

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