Publications by authors named "Jan Byska"

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Helveg: Diagrams for Software Documentation.
Adam Stepanek, David Kutak, Barbora Kozlikova, Jan Byska

IEEE Trans Vis Comput Graph· October 2025

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Visual Support for the Loop Grafting Workflow on Proteins.
Filip Opaleny, Pavol Ulbrich, Joan Planas-Iglesias, Jan Byska, Jan Stourac

IEEE Trans Vis Comput Graph· January 2025

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InVADo: Interactive Visual Analysis of Molecular Docking Data.
Marco Schafer, Nicolas Brich, Jan Byska, Sergio M Marques, David Bednar

IEEE Trans Vis Comput Graph· April 2024

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sMolBoxes: Dataflow Model for Molecular Dynamics Exploration.
Pavol Ulbrich, Manuela Waldner, Katarina Furmanova, Sergio M Marques, David Bednar, Jan Byska

IEEE Trans Vis Comput Graph· January 2023

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Vivern-A Virtual Environment for Multiscale Visualization and Modeling of DNA Nanostructures.
David Kutak, Matias Nicolas Selzer, Jan Byska, Maria Lujan Ganuza, Ivan Barisic

IEEE Trans Vis Comput Graph· December 2022

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LoopGrafter: a web tool for transplanting dynamical loops for protein engineering.
Joan Planas-Iglesias, Filip Opaleny, Pavol Ulbrich, Jan Stourac, Zainab Sanusi, Jan Byska

Nucleic Acids Res· July 2022

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LoopGrafter: Visual Support for the Grafting Workflow of Protein Loops.
Filip Opaleny, Pavol Ulbrich, Joan Planas-Iglesias, Jan Byska, Gaspar P Pinto

IEEE Trans Vis Comput Graph· September 2021

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ChemVA: Interactive Visual Analysis of Chemical Compound Similarity in Virtual Screening.
Maria Virginia Sabando, Pavol Ulbrich, Matias Selzer, Jan Byska, Jan Mican

IEEE Trans Vis Comput Graph· February 2021

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Visual Analysis of Protein-Protein Interaction Docking Models Using COZOID Tool.
Jan Byska, Adam Jurcik, Katarina Furmanova, Barbora Kozlikova, Jan J Palecek

Methods Mol Biol· January 2021

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Dynamics-function relationship in the catalytic domains of N-terminal acetyltransferases.
Angèle Abboud, Pierre Bédoucha, Jan Byška, Thomas Arnesen, Nathalie Reuter

Comput Struct Biotechnol J· March 2020

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Scale-Space Splatting: Reforming Spacetime for Cross-Scale Exploration of Integral Measures in Molecular Dynamics.
Juraj Palenik, Jan Byska, Stefan Bruckner, Helwig Hauser

IEEE Trans Vis Comput Graph· January 2020

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Multiscale Visual Drilldown for the Analysis of Large Ensembles of Multi-Body Protein Complexes.
Katarina Furmanova, Adam Jurcik, Barbora Kozlikova, Helwig Hauser, Jan Byska

IEEE Trans Vis Comput Graph· January 2020

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CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories.
Adam Jurcik, David Bednar, Jan Byska, Sergio M Marques, Katarina Furmanova

Bioinformatics· October 2018

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COZOID: contact zone identifier for visual analysis of protein-protein interactions.
Katarína Furmanová, Jan Byška, Eduard M Gröller, Ivan Viola, Jan J Paleček

BMC Bioinformatics· April 2018

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A de novo Ser111Thr variant in aquaporin-4 in a patient with intellectual disability, transient signs of brain ischemia, transient cardiac hypertrophy, and progressive gait disturbance.
Siren Berland, Trine L Toft-Bertelsen, Ingvild Aukrust, Jan Byska, Marc Vaudel

Cold Spring Harb Mol Case Stud· February 2018

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Comparative visualization of protein secondary structures.
Lucia Kocincová, Miroslava Jarešová, Jan Byška, Július Parulek, Helwig Hauser

BMC Bioinformatics· February 2017

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Interactive exploration of ligand transportation through protein tunnels.
Katarína Furmanová, Miroslava Jarešová, Jan Byška, Adam Jurčík, Július Parulek

BMC Bioinformatics· February 2017

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AnimoAminoMiner: Exploration of Protein Tunnels and their Properties in Molecular Dynamics.
Jan Byska, Mathieu Le Muzic, M Eduard Gröller, Ivan Viola, Barbora Kozlíková

IEEE Trans Vis Comput Graph· January 2016

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