Publications by authors named "Jared Broddrick"

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Energetic and genomic potential for hydrogenotrophic, formatotrophic, and acetoclastic methanogenesis in surface-expressed serpentinized fluids of the Samail Ophiolite.
Alta E G Howells, Lilja M Quinn, Miguel G Silva, Kylie Akiyama, Lucas M Fifer, Jared Broddrick

Front Microbiol· January 2025

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A second space age spanning omics, platforms and medicine across orbits.
Christopher E Mason, James Green, Konstantinos I Adamopoulos, Evan E Afshin, Jordan J Baechle, Jared T Broddrick

Nature· August 2024

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Microbial adaptation to spaceflight is correlated with bacteriophage-encoded functions.
Iris Irby, Jared T Broddrick

Nat Commun· May 2024

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The chemical neighborhood of cells in a diffusion-limited system.
Juliana Gesztesi, Jared T Broddrick, Timothy Lannin, Jessica A Lee

Front Microbiol· April 2023

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Integration of physiologically relevant photosynthetic energy flows into whole genome models of light-driven metabolism.
Jared T Broddrick, Maxwell A Ware, Denis Jallet, Bernhard O Palsson, Graham Peers

Plant J· November 2022

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Systems biology approach to functionally assess the pangenome reveals genetic diversity with discriminatory power.
Charles J Norsigian, Heather A Danhof, Colleen K Brand, Firas S Midani, Jared T Broddrick

Proc Natl Acad Sci U S A· May 2022

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Discovery of Chlorophyll : Isolation and Characterization of a Far-Red Cyanobacterium from the Original Site of Manning and Strain (1943) at Moss Beach, California.
Nancy Y Kiang, Wesley D Swingley, Dikshyant Gautam, Jared T Broddrick, Daniel J Repeta

Microorganisms· April 2022

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High-Quality Genome-Scale Models From Error-Prone, Long-Read Assemblies.
Jared T Broddrick, Richard Szubin, Charles J Norsigian, Jonathan M Monk, Bernhard O Palsson

Front Microbiol· November 2020

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Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom.
Sarah R Smith, Chris L Dupont, James K McCarthy, Jared T Broddrick, Miroslav Oborník

Nat Commun· October 2019

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Cellular responses to reactive oxygen species are predicted from molecular mechanisms.
Laurence Yang, Nathan Mih, Amitesh Anand, Joon Ho Park, Justin Tan, Jared T Broddrick

Proc Natl Acad Sci U S A· July 2019

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Cross-compartment metabolic coupling enables flexible photoprotective mechanisms in the diatom Phaeodactylum tricornutum.
Jared T Broddrick, Niu Du, Sarah R Smith, Yoshinori Tsuji, Denis Jallet

New Phytol· May 2019

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Predicting the metabolic capabilities of Synechococcus elongatus PCC 7942 adapted to different light regimes.
Jared T Broddrick, David G Welkie, Denis Jallet, Susan S Golden, Graham Peers

Metab Eng· March 2019

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A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types.
Yara Seif, Jonathan M Monk, Nathan Mih, Hannah Tsunemoto, Saugat Poudel, Jared Broddrick

PLoS Comput Biol· January 2019

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Quantitative time-course metabolomics in human red blood cells reveal the temperature dependence of human metabolic networks.
James T Yurkovich, Daniel C Zielinski, Laurence Yang, Giuseppe Paglia, Ottar Rolfsson, Jared T Broddrick

J Biol Chem· December 2017

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Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom.
Jennifer Levering, Jared Broddrick, Christopher L Dupont, Graham Peers, Karen Beeri

PLoS One· July 2017

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Unique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis.
Jared T Broddrick, Benjamin E Rubin, David G Welkie, Niu Du, Nathan Mih

Proc Natl Acad Sci U S A· December 2016

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Engineering of oleaginous organisms for lipid production.
Jennifer Levering, Jared Broddrick, Karsten Zengler

Curr Opin Biotechnol· December 2015

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Red colored IgG4 caused by vitamin B12 from cell culture media combined with disulfide reduction at harvest.
Gayle E Derfus, Jemelle Dizon-Maspat, Jared T Broddrick, Arleene C Velayo, Josh D Toschi

MAbs· May 2015

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