Publications by authors named "Jason Bonnette"

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Local adaptation of both plant and pathogen: an arms-race compromise in switchgrass rust.
Acer VanWallendael, Chathurika Wijewardana, Jason Bonnette, Lisa Vormwald, Felix B Fritschi

New Phytol· November 2025

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Changes in leaf economic trait relationships across a precipitation gradient are related to differential gene expression in a C perennial grass.
Robert W Heckman, Michael J Aspinwall, Samuel H Taylor, David B Lowry, Albina Khasanova, Jason E Bonnette

New Phytol· May 2025

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Genomic prediction of regional-scale performance in switchgrass (Panicum virgatum) by accounting for genotype-by-environment variation and yield surrogate traits.
Neal W Tilhou, Jason Bonnette, Arvid R Boe, Philip A Fay, Felix B Fritschi

G3 (Bethesda)· October 2024

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Evolutionary Analyses of Gene Expression Divergence in Panicum hallii: Exploring Constitutive and Plastic Responses Using Reciprocal Transplants.
Govinal Badiger Bhaskara, Taslima Haque, Jason E Bonnette, Joseph D Napier, Diane Bauer

Mol Biol Evol· October 2023

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Genetic determinants of switchgrass-root-associated microbiota in field sites spanning its natural range.
Joseph A Edwards, Usha Bishnoi Saran, Jason Bonnette, Alice MacQueen, Jun Yin

Curr Biol· May 2023

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Legacies of precipitation influence primary production in Panicum virgatum.
Robert W Heckman, Austin Rueda, Jason E Bonnette, Michael J Aspinwall, Albina Khasanova

Oecologia· January 2023

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Quantitative genetic-by-soil microbiome interactions in a perennial grass affect functional traits.
Albina Khasanova, Joseph Edwards, Jason Bonnette, Esther Singer, Taslima Haque

Proc Biol Sci· January 2023

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A Pleiotropic Flowering Time QTL Exhibits Gene-by-Environment Interaction for Fitness in a Perennial Grass.
Xiaoyu Weng, Taslima Haque, Li Zhang, Samsad Razzaque, John T Lovell, Jason Bonnette

Mol Biol Evol· October 2022

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Natural variation in growth and leaf ion homeostasis in response to salinity stress in .
Taslima Haque, Govinal Badiger Bhaskara, Jun Yin, Jason Bonnette, Thomas E Juenger

Front Plant Sci· October 2022

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The genetic basis for panicle trait variation in switchgrass (Panicum virgatum).
Li Zhang, Alice MacQueen, Xiaoyu Weng, Kathrine D Behrman, Jason Bonnette

Theor Appl Genet· August 2022

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Natural variation identifies new effectors of water-use efficiency in .
Govinal Badiger Bhaskara, Jesse R Lasky, Samsad Razzaque, Li Zhang, Taslima Haque, Jason E Bonnette

Proc Natl Acad Sci U S A· August 2022

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A generalist-specialist trade-off between switchgrass cytotypes impacts climate adaptation and geographic range.
Joseph D Napier, Paul P Grabowski, John T Lovell, Jason Bonnette, Sujan Mamidi

Proc Natl Acad Sci U S A· April 2022

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Impact of Harvest on Switchgrass Leaf Microbial Communities.
Esther Singer, Elizabeth M Carpenter, Jason Bonnette, Tanja Woyke, Thomas E Juenger

Genes (Basel)· December 2021

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QTL × environment interactions underlie ionome divergence in switchgrass.
Li Zhang, Alice MacQueen, Jason Bonnette, Felix B Fritschi, David B Lowry

G3 (Bethesda)· July 2021

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Geographic patterns of genomic diversity and structure in the C grass across its natural distribution.
Juan Diego Palacio-Mejía, Paul P Grabowski, Edgardo M Ortiz, Gustavo Adolfo Silva-Arias, Taslima Haque, Jason Bonnette

AoB Plants· April 2021

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Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass.
John T Lovell, Alice H MacQueen, Sujan Mamidi, Jason Bonnette, Jerry Jenkins

Nature· February 2021

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Environmentally responsive QTL controlling surface wax load in switchgrass.
Jennifer Bragg, Pernell Tomasi, Li Zhang, Tina Williams, Delilah Wood, Jason E Bonnette

Theor Appl Genet· November 2020

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Geographic variation in the genetic basis of resistance to leaf rust between locally adapted ecotypes of the biofuel crop switchgrass (Panicum virgatum).
Acer VanWallendael, Jason Bonnette, Thomas E Juenger, Felix B Fritschi, Philip A Fay

New Phytol· September 2020

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Conservation of Endophyte Bacterial Community Structure Across Two Grass Species.
Esther Singer, Jason Bonnette, Tanja Woyke, Thomas E Juenger

Front Microbiol· September 2019

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QTL × environment interactions underlie adaptive divergence in switchgrass across a large latitudinal gradient.
David B Lowry, John T Lovell, Li Zhang, Jason Bonnette, Philip A Fay

Proc Natl Acad Sci U S A· June 2019

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Plant compartment and genetic variation drive microbiome composition in switchgrass roots.
Esther Singer, Jason Bonnette, Shawn C Kenaley, Tanja Woyke, Thomas E Juenger

Environ Microbiol Rep· April 2019

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The Genetic Architecture of Shoot and Root Trait Divergence Between Mesic and Xeric Ecotypes of a Perennial Grass.
Albina Khasanova, John T Lovell, Jason Bonnette, Xiaoyu Weng, Jerry Jenkins

Front Plant Sci· April 2019

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The genomic landscape of molecular responses to natural drought stress in Panicum hallii.
John T Lovell, Jerry Jenkins, David B Lowry, Sujan Mamidi, Avinash Sreedasyam, Jason Bonnette

Nat Commun· December 2018

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Promises and Challenges of Eco-Physiological Genomics in the Field: Tests of Drought Responses in Switchgrass.
John T Lovell, Eugene V Shakirov, Scott Schwartz, David B Lowry, Michael J Aspinwall, Jason Bonnette

Plant Physiol· October 2016

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Drought responsive gene expression regulatory divergence between upland and lowland ecotypes of a perennial C4 grass.
John T Lovell, Scott Schwartz, David B Lowry, Eugene V Shakirov, Jason E Bonnette

Genome Res· April 2016

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