Publications by authors named "Jason D Kahn"

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D
DNA Structure Design Is Improved Using an Artificially Expanded Alphabet of Base Pairs Including Loop and Mismatch Thermodynamic Parameters.
Tuan M Pham, Terrel Miffin, Hongying Sun, Kenneth K Sharp, Xiaoyu Wang, Jason D Kahn

ACS Synth Biol· September 2023

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DNA Structure Design Is Improved Using an Artificially Expanded Alphabet of Base Pairs Including Loop and Mismatch Thermodynamic Parameters.
Tuan M Pham, Terrel Miffin, Hongying Sun, Kenneth K Sharp, Xiaoyu Wang, Jason D Kahn

bioRxiv· June 2023

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Faces, facets, and functions of biomolecular condensates driven by multivalent proteins and nucleic acids.
Jason D Kahn, Edward A Lemke, Rohit V Pappu

Biophys J· April 2021

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Stability of the pH-Dependent Parallel-Stranded d(CGA) Motif.
Emily M Luteran, Jason D Kahn, Paul J Paukstelis

Biophys J· October 2020

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Nucleic acid-cleaving catalytic DNA for sensing and therapeutics.
Alessandra C Zimmermann, Ian M White, Jason D Kahn

Talanta· May 2020

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Biophysics of Artificially Expanded Genetic Information Systems. Thermodynamics of DNA Duplexes Containing Matches and Mismatches Involving 2-Amino-3-nitropyridin-6-one (Z) and Imidazo[1,2-a]-1,3,5-triazin-4(8H)one (P).
Xiaoyu Wang, Shuichi Hoshika, Raymond J Peterson, Myong-Jung Kim, Steven A Benner, Jason D Kahn

ACS Synth Biol· May 2017

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Applying Thymine Isostere 2,4-Difluoro-5-Methylbenzene as a NMR Assignment Tool and Probe of Homopyrimidine/Homopurine Tract Structural Dynamics.
Robert G Brinson, Jennifer T Miller, Jason D Kahn, Stuart F J Le Grice, John P Marino

Methods Enzymol· October 2016

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Direct observation of dynamic mechanical regulation of DNA condensation by environmental stimuli.
Amy Lee, Adam Karcz, Ryan Akman, Tai Zheng, Sara Kwon, Jason D Kahn

Angew Chem Int Ed Engl· September 2014

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DNA, flexibly flexible.
Jason D Kahn

Biophys J· July 2014

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Tethered particle motion reveals that LacI·DNA loops coexist with a competitor-resistant but apparently unlooped conformation.
Joel D Revalee, Gerhard A Blab, Henry D Wilson, Jason D Kahn, Jens-Christian Meiners

Biophys J· February 2014

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Enhanced silencing and stabilization of siRNA polyplexes by histidine-mediated hydrogen bonds.
Szu-Ting Chou, Kellie Hom, Daoning Zhang, Qixin Leng, Lucas J Tricoli, Jason D Kahn

Biomaterials· January 2014

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Rationally designed coiled-coil DNA looping peptides control DNA topology.
Daniel B Gowetski, Erin J Kodis, Jason D Kahn

Nucleic Acids Res· September 2013

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LacI-DNA-IPTG loops: equilibria among conformations by single-molecule FRET.
Kathy A Goodson, Zifan Wang, Aaron R Haeusler, Jason D Kahn, Douglas S English

J Phys Chem B· April 2013

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Surface-modified HK:siRNA nanoplexes with enhanced pharmacokinetics and tumor growth inhibition.
Szu-Ting Chou, Qixin Leng, Puthupparampil Scaria, Jason D Kahn, Lucas J Tricoli

Biomacromolecules· March 2013

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FRET studies of a landscape of Lac repressor-mediated DNA loops.
Aaron R Haeusler, Kathy A Goodson, Todd D Lillian, Xiaoyu Wang, Sachin Goyal, Jason D Kahn

Nucleic Acids Res· May 2012

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Quantitative methods for measuring DNA flexibility in vitro and in vivo.
Justin P Peters, Nicole A Becker, Emily M Rueter, Zeljko Bajzer, Jason D Kahn

Methods Enzymol· May 2011

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Gene repression by minimal lac loops in vivo.
Laura M Bond, Justin P Peters, Nicole A Becker, Jason D Kahn, L James Maher

Nucleic Acids Res· December 2010

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Computational analysis of looping of a large family of highly bent DNA by LacI.
Todd D Lillian, Sachin Goyal, Jason D Kahn, Edgar Meyhöfer, N C Perkins

Biophys J· December 2008

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Eukaryotic HMGB proteins as replacements for HU in E. coli repression loop formation.
Nicole A Becker, Jason D Kahn, L James Maher

Nucleic Acids Res· July 2008

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Effects of nucleoid proteins on DNA repression loop formation in Escherichia coli.
Nicole A Becker, Jason D Kahn, L James Maher

Nucleic Acids Res· August 2007

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3D reconstruction and comparison of shapes of DNA minicircles observed by cryo-electron microscopy.
Arnaud Amzallag, Cédric Vaillant, Mathews Jacob, Michael Unser, Jan Bednar, Jason D Kahn

Nucleic Acids Res· December 2006

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Position-dependent effects of locked nucleic acid (LNA) on DNA sequencing and PCR primers.
Joshua D Levin, Dean Fiala, Meinrado F Samala, Jason D Kahn, Raymond J Peterson

Nucleic Acids Res· December 2006

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DNA bending by bHLH charge variants.
Robert J McDonald, Jason D Kahn, L James Maher

Nucleic Acids Res· November 2006

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Single-molecule spectroscopic determination of lac repressor-DNA loop conformation.
Michael A Morgan, Kenji Okamoto, Jason D Kahn, Douglas S English

Biophys J· October 2005

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Bacterial repression loops require enhanced DNA flexibility.
Nicole A Becker, Jason D Kahn, L James Maher

J Mol Biol· June 2005

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