Publications by authors named "Jason Gans"

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The impact of curation errors in the PDBBind Database on machine learning predictions of protein-protein binding affinity.
Jason D Gans, Justin E Miller, Esen Sokullu, Nileena Velappan, Ramesh K Jha

Database (Oxford)· January 2025

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Real-time PCR assays that detect genes for botulinum neurotoxin A-G subtypes.
Segaran P Pillai, Karen K Hill, Jason Gans, Theresa J Smith

Front Microbiol· May 2024

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Fast Evaluation of Viral Emerging Risks (FEVER): A computational tool for biosurveillance, diagnostics, and mutation typing of emerging viral pathogens.
Zachary R Stromberg, James Theiler, Brian T Foley, Adán Myers Y Gutiérrez, Attelia Hollander, Jason Gans

PLOS Glob Public Health· February 2022

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A cross-study analysis of drug response prediction in cancer cell lines.
Fangfang Xia, Jonathan Allen, Prasanna Balaprakash, Thomas Brettin, Cristina Garcia-Cardona, Jason Gans

Brief Bioinform· January 2022

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Optical Biosensor Platforms Display Varying Sensitivity for the Direct Detection of Influenza RNA.
Samantha J Courtney, Zachary R Stromberg, Adán Myers Y Gutiérrez, Daniel Jacobsen, Loreen R Stromberg, Jason Gans

Biosensors (Basel)· September 2021

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A public website for the automated assessment and validation of SARS-CoV-2 diagnostic PCR assays.
Po-E Li, Adán Myers Y Gutiérrez, Karen Davenport, Mark Flynn, Bin Hu, Jason D Gans

Bioinformatics· May 2021

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Appendix Q: Recommendations for Developing Molecular Assays for Microbial Pathogen Detection Using Modern In Silico Approaches.
John SantaLucia, Shanmuga Sozhamannan, Jason D Gans, Jeffrey W Koehler, Ricky Soong

J AOAC Int· July 2020

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Effects of initial microbial biomass abundance on respiration during pine litter decomposition.
Michaeline B N Albright, Andreas Runde, Deanna Lopez, Jason Gans, Sanna Sevanto

PLoS One· April 2020

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Defending Our Public Biological Databases as a Global Critical Infrastructure.
Jacob Caswell, Jason D Gans, Nicholas Generous, Corey M Hudson, Eric Merkley

Front Bioeng Biotechnol· April 2019

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Evaluation of DNA extraction methods to detect bacterial targets in aerosol samples.
John Dunbar, La Verne Gallegos-Graves, Jason Gans, Stephen A Morse, Segaran Pillai

J Microbiol Methods· October 2018

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A robust PCR primer design platform applied to the detection of Acidobacteria Group 1 in soil.
Jason D Gans, John Dunbar, Stephanie A Eichorst, La Verne Gallegos-Graves, Murray Wolinsky

Nucleic Acids Res· July 2012

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Simultaneous pathogen detection and antibiotic resistance characterization using SNP-based multiplexed oligonucleotide ligation-PCR (MOL-PCR).
Jian Song, Po-E Li, Jason Gans, Momchilo Vuyisich, Alina Deshpande

Adv Exp Med Biol· February 2011

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A rapid multiplex assay for nucleic acid-based diagnostics.
Alina Deshpande, Jason Gans, Steven W Graves, Lance Green, Laura Taylor

J Microbiol Methods· February 2010

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Steps toward broad-spectrum therapeutics: discovering virulence-associated genes present in diverse human pathogens.
Chris J Stubben, Melanie L Duffield, Ian A Cooper, Donna C Ford, Jason D Gans

BMC Genomics· October 2009

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Improved assay-dependent searching of nucleic acid sequence databases.
Jason D Gans, Murray Wolinsky

Nucleic Acids Res· July 2008

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Genomorama: genome visualization and analysis.
Jason D Gans, Murray Wolinsky

BMC Bioinformatics· June 2007

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Computational improvements reveal great bacterial diversity and high metal toxicity in soil.
Jason Gans, Murray Wolinsky, John Dunbar

Science· August 2005

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APART: automated preprocessing for NMR assignments with reduced tedium.
Norma H Pawley, Jason D Gans, Ryszard Michalczyk

Bioinformatics· March 2005

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Factors determining the reliable description of global tumbling parameters in solution NMR.
Norma H Pawley, Jason D Gans, Linda K Nicholson

J Biomol NMR· November 2002

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