Publications by authors named "Jayanth Krishnan"

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Rare metabolic gene essentiality is a determinant of microniche adaptation in Eschherichia coli.
Omid Ardalani, Patrick V Phaneuf, Jayanth Krishnan, Siddharth M Chauhan, David Pride

PLoS Pathog· December 2025

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PMkbase (version 1.0): an interactive web-based tool for tracking bacterial metabolic traits using phenotype microarrays made interoperable with sequence information and visualizing/processing PM data.
K Jayanth Krishnan, Ying Hefner, Richard Szubin, Jonathan Monk, David T Pride

Microbiol Spectr· November 2025

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Extracellular respiration is a latent energy metabolism in Escherichia coli.
Biki Bapi Kundu, Jayanth Krishnan, Richard Szubin, Arjun Patel, Bernhard O Palsson

Cell· May 2025

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iModulonDB 2.0: dynamic tools to facilitate knowledge-mining and user-enabled analyses of curated transcriptomic datasets.
Edward A Catoiu, Jayanth Krishnan, Gaoyuan Li, Xuwen A Lou, Kevin Rychel

Nucleic Acids Res· January 2025

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Diversity of Transcriptional Regulatory Adaptation in E. coli.
Christopher Dalldorf, Ying Hefner, Richard Szubin, Josefin Johnsen, Elsayed Mohamed, Jayanth Krishnan

Mol Biol Evol· November 2024

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An integrative ENCODE resource for cancer genomics.
Jing Zhang, Donghoon Lee, Vineet Dhiman, Peng Jiang, Jie Xu, Jayanth Krishnan

Nat Commun· July 2020

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Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition.
Vladimir Despic, Mario Dejung, Mengting Gu, Jayanth Krishnan, Jing Zhang

Genome Res· July 2017

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ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments.
Alexander Lachmann, Huilei Xu, Jayanth Krishnan, Seth I Berger, Amin R Mazloom

Bioinformatics· October 2010

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