Publications by authors named "Jean Davidson"

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Genetic adaptation despite high gene flow in a range-expanding population.
Andy Lee, Benjamin N Daniels, William Hemstrom, Cataixa López, Yuki Kagaya, Jean M Davidson

Mol Ecol· August 2025

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Coronavirus research topics, tracking twenty years of research.
Amir Aryani, Jingbo Wang, Luis Salvador-Carulla, Jihoon Woo, Cathy P W Cheung, Jean M Davidson

Sci Data· June 2025

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refMLST: reference-based multilocus sequence typing enables universal bacterial typing.
Mondher Khdhiri, Ella Thomas, Chanel de Smet, Priyanka Chandar, Induja Chandrakumar, Jean M Davidson

BMC Bioinformatics· August 2024

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Microbiome composition and function within the Kellet's whelk perivitelline fluid.
Benjamin N Daniels, Jenna Nurge, Chanel De Smet, Olivia Sleeper, Crow White, Jean M Davidson

Microbiol Spectr· February 2024

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Genomic DNA extraction optimization and validation for genome sequencing using the marine gastropod Kellet's whelk.
Benjamin N Daniels, Jenna Nurge, Olivia Sleeper, Andy Lee, Cataixa López, Jean M Davidson

PeerJ· December 2023

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De novo genome assembly and comparative genomics for the colonial ascidian Botrylloides violaceus.
Jack T Sumner, Cassidy L Andrasz, Christine A Johnson, Sarah Wax, Paul Anderson, Jean M Davidson

G3 (Bethesda)· September 2023

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The ENCODE Uniform Analysis Pipelines.
Benjamin C Hitz, Jin-Wook Lee, Otto Jolanki, Meenakshi S Kagda, Keenan Graham, Jean M Davidson

Res Sq· July 2023

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The ENCODE Uniform Analysis Pipelines.
Benjamin C Hitz, Lee Jin-Wook, Otto Jolanki, Meenakshi S Kagda, Keenan Graham, Jean M Davidson

bioRxiv· April 2023

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Reducing variability of breast cancer subtype predictors by grounding deep learning models in prior knowledge.
Paul Anderson, Richa Gadgil, William A Johnson, Ella Schwab, Jean M Davidson

Comput Biol Med· November 2021

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Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development.
David U Gorkin, Iros Barozzi, Yuan Zhao, Yanxiao Zhang, Hui Huang, Jean M Davidson

Nature· January 2021

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Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development.
David U Gorkin, Iros Barozzi, Yuan Zhao, Yanxiao Zhang, Hui Huang, Jean M Davidson

Nature· October 2020

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An atlas of dynamic chromatin landscapes in mouse fetal development.
David U Gorkin, Iros Barozzi, Yuan Zhao, Yanxiao Zhang, Hui Huang, Jean M Davidson

Nature· July 2020

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Yield of whole exome sequencing in undiagnosed patients facing insurance coverage barriers to genetic testing.
Chloe M Reuter, Jennefer N Kohler, Devon Bonner, Diane Zastrow, Liliana Fernandez, Jean Davidson

J Genet Couns· December 2019

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A Young Man with Trisomy 21 and Sudden Behavioral Changes.
DePorres Cormier, Emily Jean Davidson, Amy Young, Marilyn Augustyn

J Dev Behav Pediatr· November 2019

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A Patient with Sjogren's Syndrome and Subsequent Diagnosis of Inclusion Body Myositis and Light-Chain Amyloidosis.
Jason Hom, Shruti Marwaha, Anna Postolova, Jessie Kittle, Rosaline Vasquez, Jean Davidson

J Gen Intern Med· June 2019

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Identification of rare-disease genes using blood transcriptome sequencing and large control cohorts.
Laure Frésard, Craig Smail, Nicole M Ferraro, Nicole A Teran, Xin Li, Jean M Davidson

Nat Med· June 2019

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Biallelic Mutations in ATP5F1D, which Encodes a Subunit of ATP Synthase, Cause a Metabolic Disorder.
Monika Oláhová, Wan Hee Yoon, Kyle Thompson, Sharayu Jangam, Liliana Fernandez, Jean M Davidson

Am J Hum Genet· March 2018

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SWI/SNF aberrations sensitize pancreatic cancer cells to DNA crosslinking agents.
Jean Davidson, Zhewei Shen, Xue Gong, Jonathan R Pollack

Oncotarget· February 2018

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The Encyclopedia of DNA elements (ENCODE): data portal update.
Carrie A Davis, Benjamin C Hitz, Cricket A Sloan, Esther T Chan, Jean M Davidson

Nucleic Acids Res· January 2018

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Prevention of data duplication for high throughput sequencing repositories.
Idan Gabdank, Esther T Chan, Jean M Davidson, Jason A Hilton, Carrie A Davis

Database (Oxford)· January 2018

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Erratum to: Large intragenic deletion of CDC73 (exons 4-10) in a three-generation hyperparathyroidism-jaw tumor (HPT-JT) syndrome family.
Vito Guarnieri, Raewyn M Seaberg, Catherine Kelly, M Jean Davidson, Simon Raphael

BMC Med Genet· September 2017

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Large intragenic deletion of CDC73 (exons 4-10) in a three-generation hyperparathyroidism-jaw tumor (HPT-JT) syndrome family.
Vito Guarnieri, Raewyn M Seaberg, Catherine Kelly, M Jean Davidson, Simon Raphael

BMC Med Genet· August 2017

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SnoVault and encodeD: A novel object-based storage system and applications to ENCODE metadata.
Benjamin C Hitz, Laurence D Rowe, Nikhil R Podduturi, David I Glick, Ulugbek K Baymuradov, Jean M Davidson

PLoS One· April 2017

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Principles of metadata organization at the ENCODE data coordination center.
Eurie L Hong, Cricket A Sloan, Esther T Chan, Jean M Davidson, Venkat S Malladi

Database (Oxford)· October 2016

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Resources for the Comprehensive Discovery of Functional RNA Elements.
Balaji Sundararaman, Lijun Zhan, Steven M Blue, Rebecca Stanton, Keri Elkins, Jean M Davidson

Mol Cell· March 2016

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