Publications by authors named "Jeremy DeBarry"

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VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023.
Jorge Alvarez-Jarreta, Beatrice Amos, Cristina Aurrecoechea, Saikou Bah, Matthieu Barba, Jeremy D DeBarry

Nucleic Acids Res· January 2024

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Malaria disrupts the rhesus macaque gut microbiome.
Danielle N Farinella, Sukhpreet Kaur, ViLinh Tran, Monica Cabrera-Mora, Chester J Joyner, Jeremy D DeBarry

Front Cell Infect Microbiol· January 2023

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MaHPIC malaria systems biology data from Plasmodium cynomolgi sporozoite longitudinal infections in macaques.
Jeremy D DeBarry, Mustafa V Nural, Suman B Pakala, Vishal Nayak, Susanne Warrenfeltz, Megan B DeBarry

Sci Data· November 2022

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Cytoadhesion Involves SICA Variant Proteins.
Mariko S Peterson, Chester J Joyner, Stacey A Lapp, Jessica A Brady, Jennifer S Wood, Jeremy D DeBarry

Front Cell Infect Microbiol· July 2022

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VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center.
Beatrice Amos, Cristina Aurrecoechea, Matthieu Barba, Ana Barreto, Evelina Y Basenko, Jeremy DeBarry

Nucleic Acids Res· January 2022

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Clinical recovery of Macaca fascicularis infected with Plasmodium knowlesi.
Mariko S Peterson, Chester J Joyner, Jessica A Brady, Jennifer S Wood, Monica Cabrera-Mora, Jeremy D DeBarry

Malar J· December 2021

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Humoral immunity prevents clinical malaria during Plasmodium relapses without eliminating gametocytes.
Chester J Joyner, Cristiana F A Brito, Celia L Saney, Regina Joice Cordy, Maren L Smith, Jeremy D DeBarry

PLoS Pathog· September 2019

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Distinct amino acid and lipid perturbations characterize acute versus chronic malaria.
Regina Joice Cordy, Rapatbhorn Patrapuvich, Loukia N Lili, Monica Cabrera-Mora, Jung-Ting Chien, Jeremy D DeBarry

JCI Insight· May 2019

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Assembly of highly repetitive genomes using short reads: the genome of discrete typing unit III Trypanosoma cruzi strain 231.
Rodrigo P Baptista, Joao Luis Reis-Cunha, Jeremy D DeBarry, Egler Chiari, Jessica C Kissinger

Microb Genom· April 2018

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Correction to: Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques.
Yan Tang, Chester J Joyner, Monica Cabrera-Mora, Celia L Saney, Stacey A Lapp, Jeremy D DeBarry

Malar J· December 2017

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Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques.
Yan Tang, Chester J Joyner, Monica Cabrera-Mora, Celia L Saney, Stacey A Lapp, Jeremy D DeBarry

Malar J· September 2017

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The Genome of Haemoproteus tartakovskyi and Its Relationship to Human Malaria Parasites.
Staffan Bensch, Björn Canbäck, Jeremy D DeBarry, Tomas Johansson, Olof Hellgren

Genome Biol Evol· May 2016

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An evolutionary approach to identify potentially protective B cell epitopes involved in naturally acquired immunity to malaria and the role of EBA-175 in protection amongst denizens of Bolifamba, Cameroon.
Raymond B Nyasa, Helen K Kimbi, Denis Zofou, Jeremy D DeBarry, Jessica C Kissinger

Malar J· May 2016

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A survey of innovation through duplication in the reduced genomes of twelve parasites.
Jeremy D DeBarry, Jessica C Kissinger

PLoS One· February 2015

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Comparative transcriptomics and metabolomics in a rhesus macaque drug administration study.
Kevin J Lee, Weiwei Yin, Dalia Arafat, Yan Tang, Karan Uppal, Jeremy D DeBarry

Front Cell Dev Biol· December 2014

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Real-time loop-mediated isothermal amplification (RealAmp) for the species-specific identification of Plasmodium vivax.
Jaymin C Patel, Jenna Oberstaller, Maniphet Xayavong, Jothikumar Narayanan, Jeremy D DeBarry

PLoS One· July 2013

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A new single-step PCR assay for the detection of the zoonotic malaria parasite Plasmodium knowlesi.
Naomi W Lucchi, Mitra Poorak, Jenna Oberstaller, Jeremy DeBarry, Ganesh Srinivasamoorthy

PLoS One· June 2012

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MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity.
Yupeng Wang, Haibao Tang, Jeremy D Debarry, Xu Tan, Jingping Li

Nucleic Acids Res· April 2012

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Jumbled genomes: missing Apicomplexan synteny.
Jeremy D DeBarry, Jessica C Kissinger

Mol Biol Evol· October 2011

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Genome cartography: charting the apicomplexan genome.
Jessica C Kissinger, Jeremy DeBarry

Trends Parasitol· August 2011

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Applied genomics: data mining reveals species-specific malaria diagnostic targets more sensitive than 18S rRNA.
Allison Demas, Jenna Oberstaller, Jeremy DeBarry, Naomi W Lucchi, Ganesh Srinivasamoorthy

J Clin Microbiol· July 2011

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The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Jo Ann Banks, Tomoaki Nishiyama, Mitsuyasu Hasebe, John L Bowman, Michael Gribskov, Jeremy DeBarry

Science· May 2011

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De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera).
Eman K Al-Dous, Binu George, Maryam E Al-Mahmoud, Moneera Y Al-Jaber, Hao Wang, Jeremy DeBarry

Nat Biotechnol· May 2011

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Sequence analysis of bacterial artificial chromosome clones from the apospory-specific genomic region of Pennisetum and Cenchrus.
Joann A Conner, Shailendra Goel, Gunawati Gunawan, Marie-Michele Cordonnier-Pratt, Virgil Ed Johnson, Jeremy DeBarry

Plant Physiol· July 2008

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Discovery and assembly of repeat family pseudomolecules from sparse genomic sequence data using the Assisted Automated Assembler of Repeat Families (AAARF) algorithm.
Jeremy D DeBarry, Renyi Liu, Jeffrey L Bennetzen

BMC Bioinformatics· May 2008

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