Publications by authors named "Jeremy Purvis"

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Bridging single cells to organs: Mesoscale modules as fundamental units of tissue function.
Yun Chen, Ronald N Germain, Ginger L Hunter, Rajan P Kulkarni, Arthur D Lander, Jeremy E Purvis

Cell· November 2025

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Multiplexed single-cell imaging reveals diverging subpopulations with distinct senescence phenotypes during long-term senescence induction.
Garrett A Sessions, Madeline V Loops, Brian O Diekman, Jeremy E Purvis

Geroscience· June 2025

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TRIP13 protects pancreatic cancer cells against intrinsic and therapy-induced DNA replication stress.
Jay R Anand, Gaith N Droby, Sayali Joseph, Urvi Patel, Xingyuan Zhang, Jeremy E Purvis

NAR Cancer· March 2025

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TRIP13 protects pancreatic cancer cells against intrinsic and therapy-induced DNA replication stress.
Jay R Anand, Gaith N Droby, Sayali Joseph, Urvi Patel, Xingyuan Zhang, Jeremy E Purvis

bioRxiv· January 2025

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Spherical Manifolds Capture Drug-Induced Changes in Tumor Cell Cycle Behavior.
Olivia Wen, Samuel C Wolff, Wayne Stallaert, Didong Li, Jeremy E Purvis

Pac Symp Biocomput· December 2024

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Multiplexed single-cell imaging reveals diverging subpopulations with distinct senescence phenotypes during long-term senescence induction.
Garrett A Sessions, Madeline V Loops, Brian O Diekman, Jeremy E Purvis

bioRxiv· October 2024

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DELVE: feature selection for preserving biological trajectories in single-cell data.
Jolene S Ranek, Wayne Stallaert, J Justin Milner, Margaret Redick, Samuel C Wolff, Jeremy E Purvis

Nat Commun· March 2024

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Cell cycle plasticity underlies fractional resistance to palbociclib in ER+/HER2- breast tumor cells.
Tarek M Zikry, Samuel C Wolff, Jolene S Ranek, Harris M Davis, Ander Naugle, Jeremy E Purvis

Proc Natl Acad Sci U S A· February 2024

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MRE11 liberates cGAS from nucleosome sequestration during tumorigenesis.
Min-Guk Cho, Rashmi J Kumar, Chien-Chu Lin, Joshua A Boyer, Jamshaid A Shahir, Jeremy E Purvis

Nature· January 2024

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Cellograph: a semi-supervised approach to analyzing multi-condition single-cell RNA-sequencing data using graph neural networks.
Jamshaid A Shahir, Natalie Stanley, Jeremy E Purvis

BMC Bioinformatics· January 2024

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Feature selection for preserving biological trajectories in single-cell data.
Jolene S Ranek, Wayne Stallaert, Justin Milner, Natalie Stanley, Jeremy E Purvis

bioRxiv· May 2023

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Modeling collective cell behavior in cancer: Perspectives from an interdisciplinary conversation.
Frederick R Adler, Alexander R A Anderson, Abhinav Bhushan, Paul Bogdan, Jose Javier Bravo-Cordero, Jeremy E Purvis

Cell Syst· April 2023

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The consequences of differential origin licensing dynamics in distinct chromatin environments.
Liu Mei, Katarzyna M Kedziora, Eun-Ah Song, Jeremy E Purvis, Jeanette Gowen Cook

Nucleic Acids Res· September 2022

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Integrating temporal single-cell gene expression modalities for trajectory inference and disease prediction.
Jolene S Ranek, Natalie Stanley, Jeremy E Purvis

Genome Biol· September 2022

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The molecular architecture of cell cycle arrest.
Wayne Stallaert, Sovanny R Taylor, Katarzyna M Kedziora, Colin D Taylor, Holly K Sobon, Jeremy E Purvis

Mol Syst Biol· September 2022

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A Proximal-to-Distal Survey of Healthy Adult Human Small Intestine and Colon Epithelium by Single-Cell Transcriptomics.
Joseph Burclaff, R Jarrett Bliton, Keith A Breau, Meryem T Ok, Ismael Gomez-Martinez, Jeremy E Purvis

Cell Mol Gastroenterol Hepatol· April 2022

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The structure of the human cell cycle.
Wayne Stallaert, Katarzyna M Kedziora, Colin D Taylor, Tarek M Zikry, Jolene S Ranek, Jeremy E Purvis

Cell Syst· March 2022

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The structure of the human cell cycle.
Wayne Stallaert, Katarzyna M Kedziora, Colin D Taylor, Tarek M Zikry, Jolene S Ranek, Jeremy E Purvis

Cell Syst· January 2022

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Cyclin F drives proliferation through SCF-dependent degradation of the retinoblastoma-like tumor suppressor p130/RBL2.
Taylor P Enrico, Wayne Stallaert, Elizaveta T Wick, Peter Ngoi, Xianxi Wang, Jeremy E Purvis

Elife· December 2021

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Inferring the structures of signaling motifs from paired dynamic traces of single cells.
Raymond A Haggerty, Jeremy E Purvis

PLoS Comput Biol· February 2021

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Dual inhibition of DNA-PK and DNA polymerase theta overcomes radiation resistance induced by p53 deficiency.
Rashmi J Kumar, Hui Xiao Chao, Dennis A Simpson, Wanjuan Feng, Min-Guk Cho, Jeremy E Purvis

NAR Cancer· December 2020

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Autophagy regulates the localization and degradation of p16.
Philip R Coryell, Supreet K Goraya, Katherine A Griffin, Margaret A Redick, Samuel R Sisk, Jeremy E Purvis

Aging Cell· July 2020

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Bistable switches as integrators and actuators during cell cycle progression.
Wayne Stallaert, Katarzyna M Kedziora, Hui Xiao Chao, Jeremy E Purvis

FEBS Lett· October 2019

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Genetic determinants of cellular addiction to DNA polymerase theta.
Wanjuan Feng, Dennis A Simpson, Juan Carvajal-Garcia, Brandon A Price, Rashmi J Kumar, Jeremy E Purvis

Nat Commun· September 2019

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Chemical screen for epigenetic barriers to single allele activation of Oct4.
Kathryn M Headley, Katarzyna M Kedziora, Aidin Alejo, Elianna Zhi-Xiang Lai, Jeremy E Purvis

Stem Cell Res· July 2019

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