Publications by authors named "Jerzy Ciarkowski"

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Distinct 3D Architecture and Dynamics of the Human HtrA2(Omi) Protease and Its Mutated Variants.
Artur Gieldon, Dorota Zurawa-Janicka, Miroslaw Jarzab, Tomasz Wenta, Przemyslaw Golik, Jerzy Ciarkowski

PLoS One· August 2017

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Structural insights into the activation mechanisms of human HtrA serine proteases.
Dorota Zurawa-Janicka, Tomasz Wenta, Miroslaw Jarzab, Joanna Skorko-Glonek, Przemyslaw Glaza, Jerzy Ciarkowski

Arch Biochem Biophys· May 2017

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Potent antidiuretic agonists, deamino-vasopressin and desmopressin, and their inverso analogs: NMR structure and interactions with micellar and liposomic models of cell membrane.
Emilia A Lubecka, Emilia Sikorska, Dariusz Sobolewski, Adam Prahl, Jiřina Slaninová, Jerzy Ciarkowski

Biopolymers· May 2016

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Intra- and intersubunit changes accompanying thermal activation of the HtrA2(Omi) protease homotrimer.
Miroslaw Jarzab, Tomasz Wenta, Dorota Zurawa-Janicka, Agnieszka Polit, Artur J Gieldon, Jerzy Ciarkowski

Biochim Biophys Acta· March 2016

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Arginine-, D-arginine-vasopressin, and their inverso analogues in micellar and liposomic models of cell membrane: CD, NMR, and molecular dynamics studies.
Emilia A Lubecka, Emilia Sikorska, Dariusz Sobolewski, Adam Prahl, Jiřina Slaninová, Jerzy Ciarkowski

Eur Biophys J· December 2015

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Structural studies of the C-terminal 19-peptide of serum amyloid A and its Pro → Ala variants interacting with human cystatin C.
Martyna Maszota, Natalia Karska, Marta Spodzieja, Jerzy Ciarkowski, Aleksandra S Kołodziejczyk

J Mol Recognit· July 2015

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Conformational studies of neurohypophyseal hormones analogues with glycoconjugates by NMR spectroscopy.
Emilia A Lubecka, Emilia Sikorska, Alina Marcinkowska, Jerzy Ciarkowski

J Pept Sci· June 2014

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The LA loop as an important regulatory element of the HtrA (DegP) protease from Escherichia coli: structural and functional studies.
Donata Figaj, Artur Gieldon, Agnieszka Polit, Anna Sobiecka-Szkatula, Tomasz Koper, Jerzy Ciarkowski

J Biol Chem· May 2014

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Temperature-induced changes of HtrA2(Omi) protease activity and structure.
Dorota Zurawa-Janicka, Miroslaw Jarzab, Agnieszka Polit, Joanna Skorko-Glonek, Adam Lesner, Jerzy Ciarkowski

Cell Stress Chaperones· January 2013

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Highly potent antidiuretic antagonists: conformational studies of vasopressin analogues modified with 1-naphthylalanine enantiomers at position 2.
Emilia A Lubecka, Jerzy Ciarkowski, Adam Prahl, Emilia Sikorska

Chem Biol Drug Des· June 2012

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Ensemble fits of restrained peptides' conformational equilibria to NMR data. Dependence on force fields: AMBER/8 ff03 versus ECEPP/3.
Jerzy Ciarkowski, Sylwia Łuczak, Dawid Jagieła, Emilia Sikorska, Jacek Wójcik

J Mol Graph Model· February 2012

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Synthesis, biological activity and solution structure of new analogues of the antimicrobial Gramicidin S.
Elżbieta Kamysz, Beata Mickiewicz, Wojciech Kamysz, Sylwia Bielińska, Sylwia Rodziewicz-Motowidło, Jerzy Ciarkowski

J Pept Sci· March 2011

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NMR studies of new arginine vasopressin analogs modified with alpha-2-indanylglycine enantiomers at position 2 bound to sodium dodecyl sulfate micelles.
Emilia Lubecka, Anna Kwiatkowska, Jerzy Ciarkowski, Emilia Sikorska

Biophys Chem· October 2010

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The role of the L2 loop in the regulation and maintaining the proteolytic activity of HtrA (DegP) protein from Escherichia coli.
Anna Sobiecka-Szkatula, Artur Gieldon, Andrea Scire, Fabio Tanfani, Donata Figaj, Jerzy Ciarkowski

Arch Biochem Biophys· August 2010

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Temperature-induced conformational changes within the regulatory loops L1-L2-LA of the HtrA heat-shock protease from Escherichia coli.
Anna Sobiecka-Szkatula, Agnieszka Polit, Andrea Scire, Artur Gieldon, Fabio Tanfani, Jerzy Ciarkowski

Biochim Biophys Acta· November 2009

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Molecular dynamics study of the internal water molecules in vasopressin and oxytocin receptors.
Magdalena J Slusarz, Rafał Slusarz, Jerzy Ciarkowski

Protein Pept Lett· June 2009

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Conformation-activity relationships of cyclo-constrained mu/delta opioid agonists derived from the N-terminal tetrapeptide segment of dermorphin/deltorphin.
Jerzy Ciarkowski, Cezary Czaplewski, Sylwia Łuczak, Sylwia Rodziewicz-Motowidło, Irena Berezowska

Adv Exp Med Biol· June 2009

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Conformation-activity relationships of cyclo-constrained micro/delta opioid agonists derived from the N-terminal tetrapeptide segment of dermorphin/deltorphin.
Sylwia Rodziewicz-Motowidło, Cezary Czaplewski, Sylwia Luczak, Jerzy Ciarkowski

J Pept Sci· August 2008

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Deltorphin analogs restricted via a urea bridge: structure and opioid activity.
Agnieszka Zieleniak, Sylwia Rodziewicz-Motowidło, Lukasz Rusak, Nga N Chung, Cezary Czaplewski, Jerzy Ciarkowski

J Pept Sci· July 2008

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An enormously active and selective azapeptide inhibitor of cathepsin B.
Ewa Wieczerzak, Sylwia Rodziewicz-Motowidło, Elzbieta Jankowska, Artur Giełdoń, Jerzy Ciarkowski

J Pept Sci· August 2007

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Investigation of mechanism of desmopressin binding in vasopressin V2 receptor versus vasopressin V1a and oxytocin receptors: molecular dynamics simulation of the agonist-bound state in the membrane-aqueous system.
Magdalena J Slusarz, Rafał Slusarz, Jerzy Ciarkowski

Biopolymers· April 2006

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Molecular docking-based study of vasopressin analogues modified at positions 2 and 3 with N-methylphenylalanine: influence on receptor-bound conformations and interactions with vasopressin and oxytocin receptors.
Magdalena J Slusarz, Emilia Sikorska, Rafał Slusarz, Jerzy Ciarkowski

J Med Chem· April 2006

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Molecular dynamics simulation of human neurohypophyseal hormone receptors complexed with oxytocin-modeling of an activated state.
Magdalena J Slusarz, Rafał Slusarz, Jerzy Ciarkowski

J Pept Sci· March 2006

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Analysis of interactions responsible for vasopressin binding to human neurohypophyseal hormone receptors-molecular dynamics study of the activated receptor-vasopressin-G(alpha) systems.
Magdalena J Slusarz, Artur Giełdoń, Rafał Slusarz, Jerzy Ciarkowski

J Pept Sci· March 2006

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A hypothesis for GPCR activation.
Jerzy Ciarkowski, Magdalena Witt, Rafał Slusarz

J Mol Model· September 2005

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