Publications by authors named "Jessica Binder"

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Clustering rare diseases within an ontology-enriched knowledge graph.
Jaleal Sanjak, Jessica Binder, Arjun Singh Yadaw, Qian Zhu, Ewy A Mathé

J Am Med Inform Assoc· December 2023

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Toxicology knowledge graph for structural birth defects.
John Erol Evangelista, Daniel J B Clarke, Zhuorui Xie, Giacomo B Marino, Vivian Utti, Jessica L Binder

Commun Med (Lond)· July 2023

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Interpretable deep learning translation of GWAS and multi-omics findings to identify pathobiology and drug repurposing in Alzheimer's disease.
Jielin Xu, Chengsheng Mao, Yuan Hou, Yuan Luo, Jessica L Binder

Cell Rep· November 2022

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AlphaFold illuminates half of the dark human proteins.
Jessica L Binder, Joel Berendzen, Amy O Stevens, Yi He, Jian Wang

Curr Opin Struct Biol· June 2022

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Machine learning prediction and tau-based screening identifies potential Alzheimer's disease genes relevant to immunity.
Jessica Binder, Oleg Ursu, Cristian Bologa, Shanya Jiang, Nicole Maphis

Commun Biol· February 2022

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Knowledge graph analytics platform with LINCS and IDG for Parkinson's disease target illumination.
Jeremy J Yang, Christopher R Gessner, Joel L Duerksen, Daniel Biber, Jessica L Binder

BMC Bioinformatics· January 2022

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Getting Started with the IDG KMC Datasets and Tools.
Eryk Kropiwnicki, Jessica L Binder, Jeremy J Yang, Jayme Holmes, Alexander Lachmann

Curr Protoc· January 2022

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Proteopathic tau primes and activates interleukin-1β via myeloid-cell-specific MyD88- and NLRP3-ASC-inflammasome pathway.
Shanya Jiang, Nicole M Maphis, Jessica Binder, Devon Chisholm, Lea Weston

Cell Rep· September 2021

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Optical induction of autophagy via Transcription factor EB (TFEB) reduces pathological tau in neurons.
Jessica L Binder, Praveen Chander, Vojo Deretic, Jason P Weick, Kiran Bhaskar

PLoS One· June 2020

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Whole Genome Expression Analysis in a Mouse Model of Tauopathy Identifies MECP2 as a Possible Regulator of Tau Pathology.
Nicole M Maphis, Shanya Jiang, Jessica Binder, Carrie Wright, Banu Gopalan

Front Mol Neurosci· March 2017

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The contribution of Candida albicans vacuolar ATPase subunit V₁B, encoded by VMA2, to stress response, autophagy, and virulence is independent of environmental pH.
Hallie S Rane, Stella M Bernardo, Summer R Hayek, Jessica L Binder, Karlett J Parra

Eukaryot Cell· September 2014

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Candida albicans VMA3 is necessary for V-ATPase assembly and function and contributes to secretion and filamentation.
Hallie S Rane, Stella M Bernardo, Summer M Raines, Jessica L Binder, Karlett J Parra

Eukaryot Cell· October 2013

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Deletion of vacuolar proton-translocating ATPase V(o)a isoforms clarifies the role of vacuolar pH as a determinant of virulence-associated traits in Candida albicans.
Summer M Raines, Hallie S Rane, Stella M Bernardo, Jessica L Binder, Samuel A Lee

J Biol Chem· March 2013

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