Publications by authors named "Jessica S Yu"

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Comparing simulations of actin filament compression reveals tradeoff between computational cost and capturing supertwist.
Blair Lyons, Saurabh S Mogre, Karthik Vegesna, Jessica S Yu, Mark Hansen

MicroPubl Biol· January 2025

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Incorporating temporal information during feature engineering bolsters emulation of spatio-temporal emergence.
Jason Y Cain, Jacob I Evarts, Jessica S Yu, Neda Bagheri

Bioinformatics· March 2024

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Model design choices impact biological insight: Unpacking the broad landscape of spatial-temporal model development decisions.
Jessica S Yu, Neda Bagheri

PLoS Comput Biol· March 2024

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The in silico lab: Improving academic code using lessons from biology.
Jason Y Cain, Jessica S Yu, Neda Bagheri

Cell Syst· January 2023

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Mapping CAR T-Cell Design Space Using Agent-Based Models.
Alexis N Prybutok, Jessica S Yu, Joshua N Leonard, Neda Bagheri

Front Mol Biosci· July 2022

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Modular microenvironment components reproduce vascular dynamics de novo in a multi-scale agent-based model.
Jessica S Yu, Neda Bagheri

Cell Syst· August 2021

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Relationship Between Diabetes, Stress, and Self-Management to Inform Chronic Disease Product Development: Retrospective Cross-Sectional Study.
Jessica S Yu, Tong Xu, Roberta A James, Wei Lu, Julia E Hoffman

JMIR Diabetes· December 2020

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Agent-Based Models Predict Emergent Behavior of Heterogeneous Cell Populations in Dynamic Microenvironments.
Jessica S Yu, Neda Bagheri

Front Bioeng Biotechnol· June 2020

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Clinician Perceptions Related to the Use of the CBT-I Coach Mobile App.
Katherine E Miller, Eric Kuhn, Jason E Owen, Katherine Taylor, Jessica S Yu

Behav Sleep Med· December 2019

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Network inference performance complexity: a consequence of topological, experimental and algorithmic determinants.
Joseph J Muldoon, Jessica S Yu, Mohammad-Kasim Fassia, Neda Bagheri

Bioinformatics· September 2019

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Smartphone apps for insomnia: examining existing apps' usability and adherence to evidence-based principles for insomnia management.
Jessica S Yu, Eric Kuhn, Katherine E Miller, Katherine Taylor

Transl Behav Med· January 2019

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Implementation of a Guided, Digital Cognitive Behavioral Program for Anxiety in Primary Care: Preliminary Findings of Engagement and Effectiveness.
Jessica S Yu, Eva Szigethy, Meredith Wallace, Francis Solano, Megan Oser

Telemed J E Health· November 2018

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Modulating and evaluating receptor promiscuity through directed evolution and modeling.
Sarah C Stainbrook, Jessica S Yu, Michael P Reddick, Neda Bagheri, Keith E J Tyo

Protein Eng Des Sel· June 2017

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CellSort: a support vector machine tool for optimizing fluorescence-activated cell sorting and reducing experimental effort.
Jessica S Yu, Dante A Pertusi, Adebola V Adeniran, Keith E J Tyo

Bioinformatics· March 2017

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Multi-class and multi-scale models of complex biological phenomena.
Jessica S Yu, Neda Bagheri

Curr Opin Biotechnol· June 2016

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