Publications by authors named "Jessica Vamathevan"

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Molecular biology for green recovery-A call for action.
Marta Rodríguez-Martínez, Jens Nielsen, Sam Dupont, Jessica Vamathevan, Beverley J Glover

PLoS Biol· April 2022

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GA4GH: International policies and standards for data sharing across genomic research and healthcare.
Heidi L Rehm, Angela J H Page, Lindsay Smith, Jeremy B Adams, Gil Alterovitz, Jessica Vamathevan

Cell Genom· November 2021

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The challenges of designing a benchmark strategy for bioinformatics pipelines in the identification of antimicrobial resistance determinants using next generation sequencing technologies.
Alexandre Angers-Loustau, Mauro Petrillo, Johan Bengtsson-Palme, Thomas Berendonk, Burton Blais, Jessica Vamathevan

F1000Res· July 2019

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Applications of machine learning in drug discovery and development.
Jessica Vamathevan, Dominic Clark, Paul Czodrowski, Ian Dunham, Edgardo Ferran

Nat Rev Drug Discov· June 2019

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Open Targets: a platform for therapeutic target identification and validation.
Gautier Koscielny, Peter An, Denise Carvalho-Silva, Jennifer A Cham, Luca Fumis, Jessica Vamathevan

Nucleic Acids Res· January 2017

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Preclinical Characterization and In Vivo Efficacy of GSK8853, a Small-Molecule Inhibitor of the Hepatitis C Virus NS4B Protein.
Jeffrey J Pouliot, Michael Thomson, Mi Xie, Joseph Horton, John Johnson, Jessica Vamathevan

Antimicrob Agents Chemother· October 2015

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Preclinical characterization of GSK2336805, a novel inhibitor of hepatitis C virus replication that selects for resistance in NS5A.
Jill Walker, Renae Crosby, Amy Wang, Ermias Woldu, Jessica Vamathevan

Antimicrob Agents Chemother· September 2014

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In vitro characterization of GSK2485852, a novel hepatitis C virus polymerase inhibitor.
Christian Voitenleitner, Renae Crosby, Jill Walker, Katja Remlinger, Jessica Vamathevan

Antimicrob Agents Chemother· November 2013

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Minipig and beagle animal model genomes aid species selection in pharmaceutical discovery and development.
Jessica J Vamathevan, Matthew D Hall, Samiul Hasan, Peter M Woollard, Meng Xu

Toxicol Appl Pharmacol· July 2013

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Identification of novel interacting partners of Sirtuin6.
Oxana Polyakova, Satty Borman, Rachel Grimley, Jessica Vamathevan, Brian Hayes

PLoS One· May 2013

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Over expression of wild type or a catalytically dead mutant of Sirtuin 6 does not influence NFκB responses.
Rachel Grimley, Oxana Polyakova, Jessica Vamathevan, Joanne McKenary, Brian Hayes

PLoS One· March 2013

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Comparative genomics of Klebsiella pneumoniae strains with different antibiotic resistance profiles.
Vinod Kumar, Peng Sun, Jessica Vamathevan, Yong Li, Karen Ingraham

Antimicrob Agents Chemother· September 2011

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The application of next-generation sequencing technologies to drug discovery and development.
Peter M Woollard, Nalini A L Mehta, Jessica J Vamathevan, Stephanie Van Horn, Bhushan K Bonde

Drug Discov Today· June 2011

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The role of positive selection in determining the molecular cause of species differences in disease.
Jessica J Vamathevan, Samiul Hasan, Richard D Emes, Heather Amrine-Madsen, Dilip Rajagopalan

BMC Evol Biol· October 2008

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Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1.
Emmanuel F Mongodin, Nir Shapir, Sean C Daugherty, Robert T DeBoy, Joanne B Emerson, Jessica Vamathevan

PLoS Genet· December 2006

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Sequencing Bacillus anthracis typing phages gamma and cherry reveals a common ancestry.
Derrick E Fouts, David A Rasko, Regina Z Cer, Lingxia Jiang, Nadia B Fedorova, Jessica J Vamathevan

J Bacteriol· May 2006

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Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain.
Steven R Gill, Derrick E Fouts, Gordon L Archer, Emmanuel F Mongodin, Robert T Deboy, Jessica Vamathevan

J Bacteriol· April 2005

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The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans.
Brendan J Loftus, Eula Fung, Paola Roncaglia, Don Rowley, Paolo Amedeo, Jessica Vamathevan

Science· February 2005

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Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements.
Martin Wu, Ling V Sun, Jessica Vamathevan, Markus Riegler, Robert Deboy

PLoS Biol· March 2004

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Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis.
John F Heidelberg, Ian T Paulsen, Karen E Nelson, Eric J Gaidos, William C Nelson, Jessica Vamathevan

Nat Biotechnol· November 2002

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The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.
Jonathan A Eisen, Karen E Nelson, Ian T Paulsen, John F Heidelberg, Martin Wu, Jessica Vamathevan

Proc Natl Acad Sci U S A· July 2002

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